Source Code Cross Referenced for Update.java in  » Code-Analyzer » findbugs » edu » umd » cs » findbugs » workflow » Java Source Code / Java DocumentationJava Source Code and Java Documentation

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Java Source Code / Java Documentation » Code Analyzer » findbugs » edu.umd.cs.findbugs.workflow 
Source Cross Referenced  Class Diagram Java Document (Java Doc) 


001:        /*
002:         * FindBugs - Find bugs in Java programs
003:         * Copyright (C) 2003-2005 William Pugh
004:         * This library is free software; you can redistribute it and/or
005:         * modify it under the terms of the GNU Lesser General Public
006:         * License as published by the Free Software Foundation; either
007:         * version 2.1 of the License, or (at your option) any later version.
008:         * 
009:         * This library is distributed in the hope that it will be useful,
010:         * but WITHOUT ANY WARRANTY; without even the implied warranty of
011:         * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
012:         * Lesser General Public License for more details.
013:         * 
014:         * You should have received a copy of the GNU Lesser General Public
015:         * License along with this library; if not, write to the Free Software
016:         * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
017:         */
018:        package edu.umd.cs.findbugs.workflow;
019:
020:        import java.io.File;
021:        import java.io.IOException;
022:        import java.util.Comparator;
023:        import java.util.HashMap;
024:        import java.util.HashSet;
025:        import java.util.Iterator;
026:        import java.util.LinkedList;
027:        import java.util.TreeMap;
028:
029:        import org.dom4j.DocumentException;
030:
031:        import edu.umd.cs.findbugs.AppVersion;
032:        import edu.umd.cs.findbugs.BugCollection;
033:        import edu.umd.cs.findbugs.BugDesignation;
034:        import edu.umd.cs.findbugs.BugInstance;
035:        import edu.umd.cs.findbugs.ClassAnnotation;
036:        import edu.umd.cs.findbugs.DetectorFactoryCollection;
037:        import edu.umd.cs.findbugs.PackageStats;
038:        import edu.umd.cs.findbugs.Project;
039:        import edu.umd.cs.findbugs.SortedBugCollection;
040:        import edu.umd.cs.findbugs.TigerSubstitutes;
041:        import edu.umd.cs.findbugs.VersionInsensitiveBugComparator;
042:        import edu.umd.cs.findbugs.PackageStats.ClassStats;
043:        import edu.umd.cs.findbugs.config.CommandLine;
044:        import edu.umd.cs.findbugs.model.MovedClassMap;
045:
046:        /**
047:         * Java main application to compute update a historical bug collection with
048:         * results from another build/analysis.
049:         * 
050:         * @author William Pugh
051:         */
052:
053:        public class Update {
054:
055:            /**
056:             * 
057:             */
058:            private static final String USAGE = "Usage: "
059:                    + Update.class.getName()
060:                    + " [options]  data1File data2File data3File ... ";
061:
062:            private HashMap<BugInstance, BugInstance> mapFromNewToOldBug = new HashMap<BugInstance, BugInstance>();
063:
064:            private HashSet<BugInstance> matchedOldBugs = new HashSet<BugInstance>();
065:
066:            boolean noPackageMoves = false;
067:
068:            boolean preciseMatch = false;
069:            boolean precisePriorityMatch = false;
070:            int mostRecent = -1;
071:
072:            class UpdateCommandLine extends CommandLine {
073:                boolean overrideRevisionNames = false;
074:
075:                String outputFilename;
076:                boolean withMessages = false;
077:
078:                UpdateCommandLine() {
079:                    addSwitch("-overrideRevisionNames",
080:                            "override revision names for each version with names computed filenames");
081:                    addSwitch(
082:                            "-noPackageMoves",
083:                            "if a class seems to have moved from one package to another, treat warnings in that class as two seperate warnings");
084:                    addSwitch("-preciseMatch",
085:                            "require bug patterns to match precisely");
086:                    addSwitch("-precisePriorityMatch",
087:                            "only consider two warnings to be the same if their priorities match exactly");
088:                    addOption("-output", "output file",
089:                            "explicit filename for merged results (standard out used if not specified)");
090:                    addSwitch("-quiet",
091:                            "don't generate any outout to standard out unless there is an error");
092:                    addSwitch("-withMessages", "Add bug description");
093:                    addOption("-onlyMostRecent", "number",
094:                            "only use the last # input files");
095:
096:                }
097:
098:                @Override
099:                protected void handleOption(String option,
100:                        String optionExtraPart) throws IOException {
101:                    if (option.equals("-overrideRevisionNames")) {
102:                        if (optionExtraPart.length() == 0)
103:                            overrideRevisionNames = true;
104:                        else
105:                            overrideRevisionNames = TigerSubstitutes
106:                                    .parseBoolean(optionExtraPart);
107:                    } else if (option.equals("-noPackageMoves")) {
108:                        if (optionExtraPart.length() == 0)
109:                            noPackageMoves = true;
110:                        else
111:                            noPackageMoves = TigerSubstitutes
112:                                    .parseBoolean(optionExtraPart);
113:                    } else if (option.equals("-preciseMatch")) {
114:                        preciseMatch = true;
115:                    } else if (option.equals("-precisePriorityMatch")) {
116:                        versionInsensitiveBugComparator
117:                                .setComparePriorities(true);
118:                        fuzzyBugPatternMatcher.setComparePriorities(true);
119:                        precisePriorityMatch = true;
120:                    } else if (option.equals("-quiet"))
121:                        verbose = false;
122:                    else if (option.equals("-withMessages"))
123:                        withMessages = true;
124:                    else
125:                        throw new IllegalArgumentException("no option "
126:                                + option);
127:
128:                }
129:
130:                @Override
131:                protected void handleOptionWithArgument(String option,
132:                        String argument) throws IOException {
133:                    if (option.equals("-output"))
134:                        outputFilename = argument;
135:                    else if (option.equals("-onlyMostRecent")) {
136:                        mostRecent = Integer.parseInt(argument);
137:                    } else
138:                        throw new IllegalArgumentException(
139:                                "Can't handle option " + option);
140:
141:                }
142:
143:            }
144:
145:            VersionInsensitiveBugComparator versionInsensitiveBugComparator = new VersionInsensitiveBugComparator();
146:
147:            VersionInsensitiveBugComparator fuzzyBugPatternMatcher = new VersionInsensitiveBugComparator();
148:            {
149:                fuzzyBugPatternMatcher.setExactBugPatternMatch(false);
150:            }
151:
152:            HashSet<String> sourceFilesInCollection(BugCollection collection) {
153:                HashSet<String> result = new HashSet<String>();
154:                for (PackageStats pStats : collection.getProjectStats()
155:                        .getPackageStats()) {
156:                    for (ClassStats cStats : pStats.getClassStats()) {
157:                        result.add(cStats.getSourceFile());
158:                    }
159:                }
160:                return result;
161:            }
162:
163:            public void removeBaselineBugs(BugCollection baselineCollection,
164:                    BugCollection bugCollection) {
165:
166:                matchBugs(baselineCollection, bugCollection);
167:                matchBugs(SortedBugCollection.BugInstanceComparator.instance,
168:                        baselineCollection, bugCollection);
169:                matchBugs(versionInsensitiveBugComparator, baselineCollection,
170:                        bugCollection);
171:                for (Iterator<BugInstance> i = bugCollection.getCollection()
172:                        .iterator(); i.hasNext();) {
173:                    BugInstance bug = i.next();
174:                    if (matchedOldBugs.contains(bug))
175:                        i.remove();
176:                }
177:
178:            }
179:
180:            public BugCollection mergeCollections(BugCollection origCollection,
181:                    BugCollection newCollection, boolean copyDeadBugs,
182:                    boolean incrementalAnalysis) {
183:
184:                mapFromNewToOldBug.clear();
185:
186:                matchedOldBugs.clear();
187:                BugCollection resultCollection = newCollection
188:                        .createEmptyCollectionWithMetadata();
189:                // Previous sequence number
190:                long lastSequence = origCollection.getSequenceNumber();
191:                // The AppVersion history is retained from the orig collection,
192:                // adding an entry for the sequence/timestamp of the current state
193:                // of the orig collection.
194:                resultCollection.clearAppVersions();
195:                for (Iterator<AppVersion> i = origCollection
196:                        .appVersionIterator(); i.hasNext();) {
197:                    AppVersion appVersion = i.next();
198:                    resultCollection.addAppVersion((AppVersion) appVersion
199:                            .clone());
200:                }
201:                AppVersion origCollectionVersion = origCollection
202:                        .getCurrentAppVersion();
203:                AppVersion origCollectionVersionClone = new AppVersion(
204:                        lastSequence);
205:                origCollectionVersionClone.setTimestamp(origCollectionVersion
206:                        .getTimestamp());
207:                origCollectionVersionClone.setReleaseName(origCollectionVersion
208:                        .getReleaseName());
209:                origCollectionVersionClone.setNumClasses(origCollection
210:                        .getProjectStats().getNumClasses());
211:                origCollectionVersionClone.setCodeSize(origCollection
212:                        .getProjectStats().getCodeSize());
213:
214:                resultCollection.addAppVersion(origCollectionVersionClone);
215:
216:                // We assign a sequence number to the new collection as one greater than
217:                // the original collection.
218:                long currentSequence = origCollection.getSequenceNumber() + 1;
219:                resultCollection.setSequenceNumber(currentSequence);
220:
221:                int oldBugs = 0;
222:                // move all inactive bugs
223:                if (copyDeadBugs)
224:                    for (BugInstance bug : origCollection.getCollection())
225:                        if (bug.getLastVersion() != -1) {
226:                            oldBugs++;
227:                            BugInstance newBug = (BugInstance) bug.clone();
228:                            resultCollection.add(newBug, false);
229:                        }
230:
231:                matchBugs(origCollection, newCollection);
232:
233:                // matchBugs(new SloppyBugComparator(), origCollection, newCollection);
234:
235:                int newlyDeadBugs = 0;
236:                int persistantBugs = 0;
237:                int addedBugs = 0;
238:                int addedInNewCode = 0;
239:                int deadBugInDeadCode = 0;
240:
241:                HashSet<String> analyzedSourceFiles = sourceFilesInCollection(newCollection);
242:                // Copy unmatched bugs
243:                if (copyDeadBugs || incrementalAnalysis)
244:                    for (BugInstance bug : origCollection.getCollection())
245:                        if (!matchedOldBugs.contains(bug)
246:                                && bug.getLastVersion() == -1) {
247:                            newlyDeadBugs++;
248:
249:                            BugInstance newBug = (BugInstance) bug.clone();
250:
251:                            ClassAnnotation classBugFoundIn = bug
252:                                    .getPrimaryClass();
253:                            String className = classBugFoundIn.getClassName();
254:                            String sourceFile = classBugFoundIn
255:                                    .getSourceFileName();
256:                            boolean removed = sourceFile != null
257:                                    && analyzedSourceFiles.contains(sourceFile)
258:                                    || newCollection.getProjectStats()
259:                                            .getClassStats(className) != null;
260:                            if (removed) {
261:                                if (!copyDeadBugs)
262:                                    continue;
263:                                newBug
264:                                        .setRemovedByChangeOfPersistingClass(true);
265:                                newBug.setLastVersion(lastSequence);
266:                            } else {
267:                                deadBugInDeadCode++;
268:                                if (!incrementalAnalysis)
269:                                    newBug.setLastVersion(lastSequence);
270:                            }
271:
272:                            if (newBug.getLastVersion() != -1
273:                                    && newBug.getFirstVersion() > newBug
274:                                            .getLastVersion())
275:                                throw new IllegalStateException(
276:                                        "Illegal Version range: "
277:                                                + newBug.getFirstVersion()
278:                                                + ".."
279:                                                + newBug.getLastVersion());
280:                            resultCollection.add(newBug, false);
281:                        }
282:                // Copy matched bugs
283:                for (BugInstance bug : newCollection.getCollection()) {
284:                    BugInstance newBug = (BugInstance) bug.clone();
285:                    if (mapFromNewToOldBug.containsKey(bug)) {
286:                        BugInstance origWarning = mapFromNewToOldBug.get(bug);
287:                        assert origWarning.getLastVersion() == -1;
288:
289:                        copyBugHistory(origWarning, newBug);
290:                        // handle getAnnotationText()/setAnnotationText() and
291:                        // designation key
292:                        BugDesignation designation = newBug
293:                                .getUserDesignation();
294:                        if (designation != null)
295:                            designation.merge(origWarning.getUserDesignation());
296:                        else
297:                            newBug.setUserDesignation(origWarning
298:                                    .getUserDesignation()); // clone??
299:
300:                        persistantBugs++;
301:                    } else {
302:                        newBug.setFirstVersion(lastSequence + 1);
303:                        addedBugs++;
304:
305:                        ClassAnnotation classBugFoundIn = bug.getPrimaryClass();
306:
307:                        String className = classBugFoundIn.getClassName();
308:                        if (origCollection.getProjectStats().getClassStats(
309:                                className) != null) {
310:                            newBug.setIntroducedByChangeOfExistingClass(true);
311:                            // System.out.println("added bug to existing code " +
312:                            // newBug.getUniqueId() + " : " + newBug.getAbbrev() + " in
313:                            // " + classBugFoundIn);
314:                        } else
315:                            addedInNewCode++;
316:                    }
317:                    assert newBug.getLastVersion() == -1;
318:                    if (newBug.getLastVersion() != -1)
319:                        throw new IllegalStateException(
320:                                "Illegal Version range: "
321:                                        + newBug.getFirstVersion() + ".."
322:                                        + newBug.getLastVersion());
323:                    int oldSize = resultCollection.getCollection().size();
324:                    resultCollection.add(newBug, false);
325:                    int newSize = resultCollection.getCollection().size();
326:                    if (newSize != oldSize + 1) {
327:                        System.out.println("Failed to add bug #"
328:                                + newBug.getUniqueId() + " : "
329:                                + newBug.getMessage());
330:                    }
331:                }
332:                if (false && verbose) {
333:                    System.out.println(origCollection.getCollection().size()
334:                            + " orig bugs, "
335:                            + newCollection.getCollection().size()
336:                            + " new bugs");
337:                    System.out.println("Bugs: " + oldBugs + " old, "
338:                            + deadBugInDeadCode + " in removed code, "
339:                            + (newlyDeadBugs - deadBugInDeadCode) + " died, "
340:                            + persistantBugs + " persist, " + addedInNewCode
341:                            + " in new code, " + (addedBugs - addedInNewCode)
342:                            + " added");
343:                    System.out.println(resultCollection.getCollection().size()
344:                            + " resulting bugs");
345:                }
346:                return resultCollection;
347:
348:            }
349:
350:            /**
351:             * @param origCollection
352:             * @param newCollection
353:             */
354:            private void matchBugs(BugCollection origCollection,
355:                    BugCollection newCollection) {
356:                matchBugs(SortedBugCollection.BugInstanceComparator.instance,
357:                        origCollection, newCollection);
358:
359:                mapFromNewToOldBug.clear();
360:                matchedOldBugs.clear();
361:
362:                matchBugs(versionInsensitiveBugComparator, origCollection,
363:                        newCollection);
364:                if (!preciseMatch) {
365:                    matchBugs(fuzzyBugPatternMatcher, origCollection,
366:                            newCollection);
367:                }
368:                if (!noPackageMoves) {
369:                    VersionInsensitiveBugComparator movedBugComparator = new VersionInsensitiveBugComparator();
370:                    MovedClassMap movedClassMap = new MovedClassMap(
371:                            origCollection, newCollection).execute();
372:                    if (!movedClassMap.isEmpty()) {
373:                        movedBugComparator.setClassNameRewriter(movedClassMap);
374:                        movedBugComparator
375:                                .setComparePriorities(precisePriorityMatch);
376:                        matchBugs(movedBugComparator, origCollection,
377:                                newCollection);
378:                        if (!preciseMatch) {
379:                            movedBugComparator.setExactBugPatternMatch(false);
380:                            matchBugs(movedBugComparator, origCollection,
381:                                    newCollection);
382:                        }
383:                    }
384:                }
385:            }
386:
387:            boolean verbose = true;
388:
389:            public static String[] getFilePathParts(String filePath) {
390:                String regex = (File.separatorChar == '\\' ? "\\\\"
391:                        : File.separator);
392:                return filePath.split(regex);
393:            }
394:
395:            public static void main(String[] args) throws IOException,
396:                    DocumentException {
397:                new Update().doit(args);
398:            }
399:
400:            public void doit(String[] args) throws IOException,
401:                    DocumentException {
402:
403:                DetectorFactoryCollection.instance();
404:                UpdateCommandLine commandLine = new UpdateCommandLine();
405:                int argCount = commandLine.parse(args, 1, Integer.MAX_VALUE,
406:                        USAGE);
407:
408:                if (commandLine.outputFilename == null)
409:                    verbose = false;
410:                String[] firstPathParts = getFilePathParts(args[argCount]);
411:                int commonPrefix = firstPathParts.length;
412:                for (int i = argCount + 1; i <= (args.length - 1); i++) {
413:
414:                    commonPrefix = Math.min(commonPrefix, lengthCommonPrefix(
415:                            firstPathParts, getFilePathParts(args[i])));
416:                }
417:
418:                if (mostRecent > 0) {
419:                    argCount = Math.max(argCount, args.length - mostRecent);
420:                }
421:                String origFilename = args[argCount++];
422:                Project project = new Project();
423:                BugCollection origCollection;
424:                origCollection = new SortedBugCollection();
425:                if (verbose)
426:                    System.out.println("Starting with " + origFilename);
427:
428:                origCollection.readXML(origFilename, project);
429:
430:                if (commandLine.overrideRevisionNames
431:                        || origCollection.getReleaseName() == null
432:                        || origCollection.getReleaseName().length() == 0) {
433:
434:                    if (commonPrefix >= firstPathParts.length) {
435:                        // This should only happen if either
436:                        //
437:                        //   (1) there is only one input file, or
438:                        //   (2) all of the input files have the same name
439:                        //
440:                        // In either case, make the release name the same
441:                        // as the file part of the input file(s).
442:                        commonPrefix = firstPathParts.length - 1;
443:                    }
444:
445:                    origCollection.setReleaseName(firstPathParts[commonPrefix]);
446:                }
447:
448:                for (BugInstance bug : origCollection.getCollection())
449:                    if (bug.getLastVersion() >= 0
450:                            && bug.getFirstVersion() > bug.getLastVersion())
451:                        throw new IllegalStateException(
452:                                "Illegal Version range: "
453:                                        + bug.getFirstVersion() + ".."
454:                                        + bug.getLastVersion());
455:
456:                while (argCount <= (args.length - 1)) {
457:
458:                    BugCollection newCollection = new SortedBugCollection();
459:
460:                    String newFilename = args[argCount++];
461:                    if (verbose)
462:                        System.out.println("Merging " + newFilename);
463:                    project = new Project();
464:                    try {
465:                        File f = new File(newFilename);
466:                        if (f.length() == 0) {
467:                            if (verbose)
468:                                System.out.println("Empty input file: " + f);
469:                            continue;
470:                        }
471:                        newCollection.readXML(newFilename, project);
472:
473:                        if (commandLine.overrideRevisionNames
474:                                || newCollection.getReleaseName() == null
475:                                || newCollection.getReleaseName().length() == 0)
476:                            newCollection
477:                                    .setReleaseName(getFilePathParts(newFilename)[commonPrefix]);
478:
479:                        origCollection = mergeCollections(origCollection,
480:                                newCollection, true, false);
481:                    } catch (IOException e) {
482:                        if (verbose)
483:                            System.out.println(e);
484:                        else
485:                            throw e;
486:                    }
487:                }
488:
489:                origCollection.setWithMessages(commandLine.withMessages);
490:                if (commandLine.outputFilename != null)
491:                    origCollection
492:                            .writeXML(commandLine.outputFilename, project);
493:                else
494:                    origCollection.writeXML(System.out, project);
495:
496:            }
497:
498:            private static int lengthCommonPrefix(String[] string,
499:                    String[] string2) {
500:                int maxLength = Math.min(string.length, string2.length);
501:                for (int result = 0; result < maxLength; result++)
502:                    if (!string[result].equals(string2[result]))
503:                        return result;
504:                return maxLength;
505:            }
506:
507:            private static void copyBugHistory(BugInstance src, BugInstance dest) {
508:
509:                dest.setFirstVersion(src.getFirstVersion());
510:                dest.setLastVersion(src.getLastVersion());
511:                dest.setIntroducedByChangeOfExistingClass(src
512:                        .isIntroducedByChangeOfExistingClass());
513:                dest.setRemovedByChangeOfPersistingClass(src
514:                        .isRemovedByChangeOfPersistingClass());
515:            }
516:
517:            private void matchBugs(
518:                    Comparator<BugInstance> bugInstanceComparator,
519:                    BugCollection origCollection, BugCollection newCollection) {
520:
521:                TreeMap<BugInstance, LinkedList<BugInstance>> set = new TreeMap<BugInstance, LinkedList<BugInstance>>(
522:                        bugInstanceComparator);
523:                int oldBugs = 0;
524:                int newBugs = 0;
525:                int matchedBugs = 0;
526:                for (BugInstance bug : origCollection.getCollection())
527:                    if (bug.getLastVersion() == -1
528:                            && !matchedOldBugs.contains(bug)) {
529:                        oldBugs++;
530:                        LinkedList<BugInstance> q = set.get(bug);
531:                        if (q == null) {
532:                            q = new LinkedList<BugInstance>();
533:                            set.put(bug, q);
534:                        }
535:                        q.add(bug);
536:                    }
537:                for (BugInstance bug : newCollection.getCollection())
538:                    if (!mapFromNewToOldBug.containsKey(bug)) {
539:                        newBugs++;
540:                        LinkedList<BugInstance> q = set.get(bug);
541:                        if (q != null && !q.isEmpty()) {
542:                            matchedBugs++;
543:                            BugInstance matchedBug = q.removeFirst();
544:                            mapFromNewToOldBug.put(bug, matchedBug);
545:                            matchedOldBugs.add(matchedBug);
546:                        }
547:                    }
548:                if (false && verbose)
549:                    System.out.println("matched " + matchedBugs + " of "
550:                            + oldBugs + "o/" + newBugs + "n bugs using "
551:                            + bugInstanceComparator.getClass().getName());
552:            }
553:
554:        }
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