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Java Source Code / Java Documentation » Science » weka » weka.classifiers.bayes 
Source Cross Reference  Class Diagram Java Document (Java Doc) 


java.lang.Object
   weka.classifiers.Classifier
      weka.classifiers.bayes.NaiveBayesMultinomial

All known Subclasses:   weka.classifiers.bayes.NaiveBayesMultinomialUpdateable,
NaiveBayesMultinomial
public class NaiveBayesMultinomial extends Classifier implements WeightedInstancesHandler,TechnicalInformationHandler(Code)
Class for building and using a multinomial Naive Bayes classifier. For more information see,

Andrew Mccallum, Kamal Nigam: A Comparison of Event Models for Naive Bayes Text Classification. In: AAAI-98 Workshop on 'Learning for Text Categorization', 1998.

The core equation for this classifier:

P[Ci|D] = (P[D|Ci] x P[Ci]) / P[D] (Bayes rule)

where Ci is class i and D is a document.

BibTeX:

 @inproceedings{Mccallum1998,
 author = {Andrew Mccallum and Kamal Nigam},
 booktitle = {AAAI-98 Workshop on 'Learning for Text Categorization'},
 title = {A Comparison of Event Models for Naive Bayes Text Classification},
 year = {1998}
 }
 

Valid options are:

 -D
 If set, classifier is run in debug mode and
 may output additional info to the console

author:
   Andrew Golightly (acg4@cs.waikato.ac.nz)
author:
   Bernhard Pfahringer (bernhard@cs.waikato.ac.nz)
version:
   $Revision: 1.15 $


Field Summary
protected  Instancesm_headerInfo
    
protected  double[]m_lnFactorialCache
    
protected  intm_numAttributes
    
protected  intm_numClasses
    
protected  double[]m_probOfClass
     the probability of a class (i.e.
protected  double[][]m_probOfWordGivenClass
     probability that a word (w) exists in a class (H) (i.e.
final static  longserialVersionUID
    


Method Summary
public  voidbuildClassifier(Instances instances)
     Generates the classifier.
public  double[]distributionForInstance(Instance instance)
     Calculates the class membership probabilities for the given test instance.
public  CapabilitiesgetCapabilities()
     Returns default capabilities of the classifier.
public  TechnicalInformationgetTechnicalInformation()
     Returns an instance of a TechnicalInformation object, containing detailed information about the technical background of this class, e.g., paper reference or book this class is based on.
public  StringglobalInfo()
    
public  doublelnFactorial(int n)
    
public static  voidmain(String[] argv)
     Main method for testing this class.
public  StringtoString()
     Returns a string representation of the classifier.

Field Detail
m_headerInfo
protected Instances m_headerInfo(Code)
copy of header information for use in toString method



m_lnFactorialCache
protected double[] m_lnFactorialCache(Code)
cache lnFactorial computations



m_numAttributes
protected int m_numAttributes(Code)
number of unique words



m_numClasses
protected int m_numClasses(Code)
number of class values



m_probOfClass
protected double[] m_probOfClass(Code)
the probability of a class (i.e. Pr[H])



m_probOfWordGivenClass
protected double[][] m_probOfWordGivenClass(Code)
probability that a word (w) exists in a class (H) (i.e. Pr[w|H]) The matrix is in the this format: probOfWordGivenClass[class][wordAttribute] NOTE: the values are actually the log of Pr[w|H]



serialVersionUID
final static long serialVersionUID(Code)
for serialization





Method Detail
buildClassifier
public void buildClassifier(Instances instances) throws Exception(Code)
Generates the classifier.
Parameters:
  instances - set of instances serving as training data
throws:
  Exception - if the classifier has not been generated successfully



distributionForInstance
public double[] distributionForInstance(Instance instance) throws Exception(Code)
Calculates the class membership probabilities for the given test instance.
Parameters:
  instance - the instance to be classified predicted class probability distribution
throws:
  Exception - if there is a problem generating the prediction



getCapabilities
public Capabilities getCapabilities()(Code)
Returns default capabilities of the classifier. the capabilities of this classifier



getTechnicalInformation
public TechnicalInformation getTechnicalInformation()(Code)
Returns an instance of a TechnicalInformation object, containing detailed information about the technical background of this class, e.g., paper reference or book this class is based on. the technical information about this class



globalInfo
public String globalInfo()(Code)
Returns a string describing this classifier a description of the classifier suitable fordisplaying in the explorer/experimenter gui



lnFactorial
public double lnFactorial(int n)(Code)
Fast computation of ln(n!) for non-negative ints negative ints are passed on to the general gamma-function based version in weka.core.SpecialFunctions if the current n value is higher than any previous one, the cache is extended and filled to cover it the common case is reduced to a simple array lookup
Parameters:
  n - the integer ln(n!)



main
public static void main(String[] argv)(Code)
Main method for testing this class.
Parameters:
  argv - the options



toString
public String toString()(Code)
Returns a string representation of the classifier. a string representation of the classifier



Fields inherited from weka.classifiers.Classifier
protected boolean m_Debug(Code)(Java Doc)

Methods inherited from weka.classifiers.Classifier
abstract public void buildClassifier(Instances data) throws Exception(Code)(Java Doc)
public double classifyInstance(Instance instance) throws Exception(Code)(Java Doc)
public String debugTipText()(Code)(Java Doc)
public double[] distributionForInstance(Instance instance) throws Exception(Code)(Java Doc)
public static Classifier forName(String classifierName, String[] options) throws Exception(Code)(Java Doc)
public Capabilities getCapabilities()(Code)(Java Doc)
public boolean getDebug()(Code)(Java Doc)
public String[] getOptions()(Code)(Java Doc)
public Enumeration listOptions()(Code)(Java Doc)
public static Classifier[] makeCopies(Classifier model, int num) throws Exception(Code)(Java Doc)
public static Classifier makeCopy(Classifier model) throws Exception(Code)(Java Doc)
protected static void runClassifier(Classifier classifier, String[] options)(Code)(Java Doc)
public void setDebug(boolean debug)(Code)(Java Doc)
public void setOptions(String[] options) throws Exception(Code)(Java Doc)

Methods inherited from java.lang.Object
native protected Object clone() throws CloneNotSupportedException(Code)(Java Doc)
public boolean equals(Object obj)(Code)(Java Doc)
protected void finalize() throws Throwable(Code)(Java Doc)
final native public Class getClass()(Code)(Java Doc)
native public int hashCode()(Code)(Java Doc)
final native public void notify()(Code)(Java Doc)
final native public void notifyAll()(Code)(Java Doc)
public String toString()(Code)(Java Doc)
final native public void wait(long timeout) throws InterruptedException(Code)(Java Doc)
final public void wait(long timeout, int nanos) throws InterruptedException(Code)(Java Doc)
final public void wait() throws InterruptedException(Code)(Java Doc)

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