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Java Source Code / Java Documentation » Science » weka » weka.classifiers.mi 
Source Cross Reference  Class Diagram Java Document (Java Doc) 


java.lang.Object
   weka.classifiers.Classifier
      weka.classifiers.mi.MISVM

MISVM
public class MISVM extends Classifier implements OptionHandler,MultiInstanceCapabilitiesHandler,TechnicalInformationHandler(Code)
Implements Stuart Andrews' mi_SVM (Maximum pattern Margin Formulation of MIL). Applying weka.classifiers.functions.SMO to solve multiple instances problem.
The algorithm first assign the bag label to each instance in the bag as its initial class label. After that applying SMO to compute SVM solution for all instances in positive bags And then reassign the class label of each instance in the positive bag according to the SVM result Keep on iteration until labels do not change anymore.

For more information see:

Stuart Andrews, Ioannis Tsochantaridis, Thomas Hofmann: Support Vector Machines for Multiple-Instance Learning. In: Advances in Neural Information Processing Systems 15, 561-568, 2003.

BibTeX:

 @inproceedings{Andrews2003,
 author = {Stuart Andrews and Ioannis Tsochantaridis and Thomas Hofmann},
 booktitle = {Advances in Neural Information Processing Systems 15},
 pages = {561-568},
 publisher = {MIT Press},
 title = {Support Vector Machines for Multiple-Instance Learning},
 year = {2003}
 }
 

Valid options are:

 -D
 If set, classifier is run in debug mode and
 may output additional info to the console
 -C <double>
 The complexity constant C. (default 1)
 -N <default 0>
 Whether to 0=normalize/1=standardize/2=neither.
 (default: 0=normalize)
 -I <num>
 The maximum number of iterations to perform.
 (default: 500)
 -K <classname and parameters>
 The Kernel to use.
 (default: weka.classifiers.functions.supportVector.PolyKernel)
 
 Options specific to kernel weka.classifiers.functions.supportVector.PolyKernel:
 
 -D
 Enables debugging output (if available) to be printed.
 (default: off)
 -no-checks
 Turns off all checks - use with caution!
 (default: checks on)
 -C <num>
 The size of the cache (a prime number).
 (default: 250007)
 -E <num>
 The Exponent to use.
 (default: 1.0)
 -L
 Use lower-order terms.
 (default: no)

author:
   Lin Dong (ld21@cs.waikato.ac.nz)
version:
   $Revision: 1.4 $
See Also:   weka.classifiers.functions.SMO


Field Summary
final public static  intFILTER_NONE
    
final public static  intFILTER_NORMALIZE
    
final public static  intFILTER_STANDARDIZE
    
final public static  Tag[]TAGS_FILTER
    
protected  doublem_C
     The complexity parameter.
protected  MultiInstanceToPropositionalm_ConvertToProp
    
protected  Filterm_Filter
     The filter used to standardize/normalize all values.
protected  intm_MaxIterations
    
protected  SVMm_SVM
    
protected  Filterm_SparseFilter
    
protected  intm_filterType
    
protected  Kernelm_kernel
    
final static  longserialVersionUID
    


Method Summary
public  voidbuildClassifier(Instances train)
    
public  StringcTipText()
    
public  double[]distributionForInstance(Instance exmp)
    
public  StringfilterTypeTipText()
    
public  doublegetC()
     Get the value of C.
public  CapabilitiesgetCapabilities()
     Returns default capabilities of the classifier.
public  SelectedTaggetFilterType()
     Gets how the training data will be transformed.
public  KernelgetKernel()
     Gets the kernel to use.
public  intgetMaxIterations()
     Gets the maximum number of iterations.
public  CapabilitiesgetMultiInstanceCapabilities()
     Returns the capabilities of this multi-instance classifier for the relational data.
public  String[]getOptions()
     Gets the current settings of the classifier.
public  TechnicalInformationgetTechnicalInformation()
     Returns an instance of a TechnicalInformation object, containing detailed information about the technical background of this class, e.g., paper reference or book this class is based on.
public  StringglobalInfo()
    
public  StringkernelTipText()
    
public  EnumerationlistOptions()
    
public static  voidmain(String[] argv)
     Main method for testing this class.
public  StringmaxIterationsTipText()
    
public  voidsetC(double v)
     Set the value of C.
public  voidsetFilterType(SelectedTag newType)
     Sets how the training data will be transformed.
public  voidsetKernel(Kernel value)
     Sets the kernel to use.
public  voidsetMaxIterations(int value)
     Sets the maximum number of iterations.
public  voidsetOptions(String[] options)
     Parses a given list of options.

Field Detail
FILTER_NONE
final public static int FILTER_NONE(Code)
No normalization/standardization



FILTER_NORMALIZE
final public static int FILTER_NORMALIZE(Code)
Normalize training data



FILTER_STANDARDIZE
final public static int FILTER_STANDARDIZE(Code)
Standardize training data



TAGS_FILTER
final public static Tag[] TAGS_FILTER(Code)
The filter to apply to the training data



m_C
protected double m_C(Code)
The complexity parameter.



m_ConvertToProp
protected MultiInstanceToPropositional m_ConvertToProp(Code)
filter used to convert the MI dataset into single-instance dataset



m_Filter
protected Filter m_Filter(Code)
The filter used to standardize/normalize all values.



m_MaxIterations
protected int m_MaxIterations(Code)
the maximum number of iterations to perform



m_SVM
protected SVM m_SVM(Code)
The SMO classifier used to compute SVM soluton w,b for the dataset



m_SparseFilter
protected Filter m_SparseFilter(Code)
The filter used to transform the sparse datasets to nonsparse



m_filterType
protected int m_filterType(Code)
Whether to normalize/standardize/neither



m_kernel
protected Kernel m_kernel(Code)
the kernel to use



serialVersionUID
final static long serialVersionUID(Code)
for serialization





Method Detail
buildClassifier
public void buildClassifier(Instances train) throws Exception(Code)
Builds the classifier
Parameters:
  train - the training data to be used for generating theboosted classifier.
throws:
  Exception - if the classifier could not be built successfully



cTipText
public String cTipText()(Code)
Returns the tip text for this property tip text for this property suitable fordisplaying in the explorer/experimenter gui



distributionForInstance
public double[] distributionForInstance(Instance exmp) throws Exception(Code)
Computes the distribution for a given exemplar
Parameters:
  exmp - the exemplar for which distribution is computed the distribution
throws:
  Exception - if the distribution can't be computed successfully



filterTypeTipText
public String filterTypeTipText()(Code)
Returns the tip text for this property tip text for this property suitable fordisplaying in the explorer/experimenter gui



getC
public double getC()(Code)
Get the value of C. Value of C.



getCapabilities
public Capabilities getCapabilities()(Code)
Returns default capabilities of the classifier. the capabilities of this classifier



getFilterType
public SelectedTag getFilterType()(Code)
Gets how the training data will be transformed. Will be one of FILTER_NORMALIZE, FILTER_STANDARDIZE, FILTER_NONE. the filtering mode



getKernel
public Kernel getKernel()(Code)
Gets the kernel to use. the kernel



getMaxIterations
public int getMaxIterations()(Code)
Gets the maximum number of iterations. the maximum number of iterations.



getMultiInstanceCapabilities
public Capabilities getMultiInstanceCapabilities()(Code)
Returns the capabilities of this multi-instance classifier for the relational data. the capabilities of this object
See Also:   Capabilities



getOptions
public String[] getOptions()(Code)
Gets the current settings of the classifier. an array of strings suitable for passing to setOptions



getTechnicalInformation
public TechnicalInformation getTechnicalInformation()(Code)
Returns an instance of a TechnicalInformation object, containing detailed information about the technical background of this class, e.g., paper reference or book this class is based on. the technical information about this class



globalInfo
public String globalInfo()(Code)
Returns a string describing this filter a description of the filter suitable fordisplaying in the explorer/experimenter gui



kernelTipText
public String kernelTipText()(Code)
Returns the tip text for this property tip text for this property suitable fordisplaying in the explorer/experimenter gui



listOptions
public Enumeration listOptions()(Code)
Returns an enumeration describing the available options an enumeration of all the available options



main
public static void main(String[] argv)(Code)
Main method for testing this class.
Parameters:
  argv - should contain the command line arguments to thescheme (see Evaluation)



maxIterationsTipText
public String maxIterationsTipText()(Code)
Returns the tip text for this property tip text for this property suitable fordisplaying in the explorer/experimenter gui



setC
public void setC(double v)(Code)
Set the value of C.
Parameters:
  v - Value to assign to C.



setFilterType
public void setFilterType(SelectedTag newType)(Code)
Sets how the training data will be transformed. Should be one of FILTER_NORMALIZE, FILTER_STANDARDIZE, FILTER_NONE.
Parameters:
  newType - the new filtering mode



setKernel
public void setKernel(Kernel value)(Code)
Sets the kernel to use.
Parameters:
  value - the kernel



setMaxIterations
public void setMaxIterations(int value)(Code)
Sets the maximum number of iterations.
Parameters:
  value - the maximum number of iterations.



setOptions
public void setOptions(String[] options) throws Exception(Code)
Parses a given list of options.

Valid options are:

 -D
 If set, classifier is run in debug mode and
 may output additional info to the console
 -C <double>
 The complexity constant C. (default 1)
 -N <default 0>
 Whether to 0=normalize/1=standardize/2=neither.
 (default: 0=normalize)
 -I <num>
 The maximum number of iterations to perform.
 (default: 500)
 -K <classname and parameters>
 The Kernel to use.
 (default: weka.classifiers.functions.supportVector.PolyKernel)
 
 Options specific to kernel weka.classifiers.functions.supportVector.PolyKernel:
 
 -D
 Enables debugging output (if available) to be printed.
 (default: off)
 -no-checks
 Turns off all checks - use with caution!
 (default: checks on)
 -C <num>
 The size of the cache (a prime number).
 (default: 250007)
 -E <num>
 The Exponent to use.
 (default: 1.0)
 -L
 Use lower-order terms.
 (default: no)

Parameters:
  options - the list of options as an array of strings
throws:
  Exception - if an option is not supported



Fields inherited from weka.classifiers.Classifier
protected boolean m_Debug(Code)(Java Doc)

Methods inherited from weka.classifiers.Classifier
abstract public void buildClassifier(Instances data) throws Exception(Code)(Java Doc)
public double classifyInstance(Instance instance) throws Exception(Code)(Java Doc)
public String debugTipText()(Code)(Java Doc)
public double[] distributionForInstance(Instance instance) throws Exception(Code)(Java Doc)
public static Classifier forName(String classifierName, String[] options) throws Exception(Code)(Java Doc)
public Capabilities getCapabilities()(Code)(Java Doc)
public boolean getDebug()(Code)(Java Doc)
public String[] getOptions()(Code)(Java Doc)
public Enumeration listOptions()(Code)(Java Doc)
public static Classifier[] makeCopies(Classifier model, int num) throws Exception(Code)(Java Doc)
public static Classifier makeCopy(Classifier model) throws Exception(Code)(Java Doc)
protected static void runClassifier(Classifier classifier, String[] options)(Code)(Java Doc)
public void setDebug(boolean debug)(Code)(Java Doc)
public void setOptions(String[] options) throws Exception(Code)(Java Doc)

Methods inherited from java.lang.Object
native protected Object clone() throws CloneNotSupportedException(Code)(Java Doc)
public boolean equals(Object obj)(Code)(Java Doc)
protected void finalize() throws Throwable(Code)(Java Doc)
final native public Class getClass()(Code)(Java Doc)
native public int hashCode()(Code)(Java Doc)
final native public void notify()(Code)(Java Doc)
final native public void notifyAll()(Code)(Java Doc)
public String toString()(Code)(Java Doc)
final native public void wait(long timeout) throws InterruptedException(Code)(Java Doc)
final public void wait(long timeout, int nanos) throws InterruptedException(Code)(Java Doc)
final public void wait() throws InterruptedException(Code)(Java Doc)

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