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Java Source Code / Java Documentation » Science » weka » weka.filters.unsupervised.instance 
Source Cross Reference  Class Diagram Java Document (Java Doc) 


java.lang.Object
   weka.filters.Filter
      weka.filters.unsupervised.instance.Resample

Resample
public class Resample extends Filter implements UnsupervisedFilter,OptionHandler(Code)
Produces a random subsample of a dataset using either sampling with replacement or without replacement. The original dataset must fit entirely in memory. The number of instances in the generated dataset may be specified. When used in batch mode, subsequent batches are NOT resampled.

Valid options are:

 -S <num>
 Specify the random number seed (default 1)
 -Z <num>
 The size of the output dataset, as a percentage of
 the input dataset (default 100)
 -no-replacement
 Disables replacement of instances
 (default: with replacement)
 -V
 Inverts the selection - only available with '-no-replacement'.

author:
   Len Trigg (len@reeltwo.com)
author:
   FracPete (fracpete at waikato dot ac dot nz)
version:
   $Revision: 1.9 $


Field Summary
protected  booleanm_InvertSelection
    
protected  booleanm_NoReplacement
    
protected  intm_RandomSeed
    
protected  doublem_SampleSizePercent
    
final static  longserialVersionUID
    


Method Summary
public  booleanbatchFinished()
     Signify that this batch of input to the filter is finished.
protected  voidcreateSubsample()
     Creates a subsample of the current set of input instances.
public  voidcreateSubsampleWithReplacement(Random random, int origSize, int sampleSize)
    
public  voidcreateSubsampleWithoutReplacement(Random random, int origSize, int sampleSize)
    
public  CapabilitiesgetCapabilities()
     Returns the Capabilities of this filter.
public  booleangetInvertSelection()
     Gets whether selection is inverted (only if instances are drawn WIHTOUT replacement).
public  booleangetNoReplacement()
     Gets whether instances are drawn with or without replacement.
public  String[]getOptions()
     Gets the current settings of the filter.
public  intgetRandomSeed()
     Gets the random number seed.
public  doublegetSampleSizePercent()
     Gets the subsample size as a percentage of the original set.
public  StringglobalInfo()
    
public  booleaninput(Instance instance)
     Input an instance for filtering.
public  StringinvertSelectionTipText()
    
public  EnumerationlistOptions()
     Returns an enumeration describing the available options.
public static  voidmain(String[] argv)
     Main method for testing this class.
public  StringnoReplacementTipText()
    
public  StringrandomSeedTipText()
    
public  StringsampleSizePercentTipText()
    
public  booleansetInputFormat(Instances instanceInfo)
     Sets the format of the input instances.
Parameters:
  instanceInfo - an Instances object containing the input instance structure (any instances contained in the object are ignored - only the structure is required).
public  voidsetInvertSelection(boolean value)
     Sets whether the selection is inverted (only if instances are drawn WIHTOUT replacement).
public  voidsetNoReplacement(boolean value)
     Sets whether instances are drawn with or with out replacement.
public  voidsetOptions(String[] options)
     Parses a given list of options.
public  voidsetRandomSeed(int newSeed)
     Sets the random number seed.
public  voidsetSampleSizePercent(double newSampleSizePercent)
     Sets the size of the subsample, as a percentage of the original set.

Field Detail
m_InvertSelection
protected boolean m_InvertSelection(Code)
Whether to invert the selection (only if instances are drawn WITHOUT replacement)
See Also:   Resample.m_NoReplacement
See Also:   



m_NoReplacement
protected boolean m_NoReplacement(Code)
Whether to perform sampling with replacement or without



m_RandomSeed
protected int m_RandomSeed(Code)
The random number generator seed



m_SampleSizePercent
protected double m_SampleSizePercent(Code)
The subsample size, percent of original set, default 100%



serialVersionUID
final static long serialVersionUID(Code)
for serialization





Method Detail
batchFinished
public boolean batchFinished()(Code)
Signify that this batch of input to the filter is finished. If the filter requires all instances prior to filtering, output() may now be called to retrieve the filtered instances. true if there are instances pending output
throws:
  IllegalStateException - if no input structure has been defined



createSubsample
protected void createSubsample()(Code)
Creates a subsample of the current set of input instances. The output instances are pushed onto the output queue for collection.



createSubsampleWithReplacement
public void createSubsampleWithReplacement(Random random, int origSize, int sampleSize)(Code)
creates the subsample with replacement
Parameters:
  random - the random number generator to use
Parameters:
  origSize - the original size of the dataset
Parameters:
  sampleSize - the size to generate



createSubsampleWithoutReplacement
public void createSubsampleWithoutReplacement(Random random, int origSize, int sampleSize)(Code)
creates the subsample without replacement
Parameters:
  random - the random number generator to use
Parameters:
  origSize - the original size of the dataset
Parameters:
  sampleSize - the size to generate



getCapabilities
public Capabilities getCapabilities()(Code)
Returns the Capabilities of this filter. the capabilities of this object
See Also:   Capabilities



getInvertSelection
public boolean getInvertSelection()(Code)
Gets whether selection is inverted (only if instances are drawn WIHTOUT replacement). true if the replacement is disabled
See Also:   Resample.m_NoReplacement



getNoReplacement
public boolean getNoReplacement()(Code)
Gets whether instances are drawn with or without replacement. true if the replacement is disabled



getOptions
public String[] getOptions()(Code)
Gets the current settings of the filter. an array of strings suitable for passing to setOptions



getRandomSeed
public int getRandomSeed()(Code)
Gets the random number seed. the random number seed.



getSampleSizePercent
public double getSampleSizePercent()(Code)
Gets the subsample size as a percentage of the original set. the subsample size



globalInfo
public String globalInfo()(Code)
Returns a string describing this classifier a description of the classifier suitable fordisplaying in the explorer/experimenter gui



input
public boolean input(Instance instance)(Code)
Input an instance for filtering. Filter requires all training instances be read before producing output.
Parameters:
  instance - the input instance true if the filtered instance may now becollected with output().
throws:
  IllegalStateException - if no input structure has been defined



invertSelectionTipText
public String invertSelectionTipText()(Code)
Returns the tip text for this property tip text for this property suitable fordisplaying in the explorer/experimenter gui



listOptions
public Enumeration listOptions()(Code)
Returns an enumeration describing the available options. an enumeration of all the available options.



main
public static void main(String[] argv)(Code)
Main method for testing this class.
Parameters:
  argv - should contain arguments to the filter: use -h for help



noReplacementTipText
public String noReplacementTipText()(Code)
Returns the tip text for this property tip text for this property suitable fordisplaying in the explorer/experimenter gui



randomSeedTipText
public String randomSeedTipText()(Code)
Returns the tip text for this property tip text for this property suitable fordisplaying in the explorer/experimenter gui



sampleSizePercentTipText
public String sampleSizePercentTipText()(Code)
Returns the tip text for this property tip text for this property suitable fordisplaying in the explorer/experimenter gui



setInputFormat
public boolean setInputFormat(Instances instanceInfo) throws Exception(Code)
Sets the format of the input instances.
Parameters:
  instanceInfo - an Instances object containing the input instance structure (any instances contained in the object are ignored - only the structure is required). true if the outputFormat may be collected immediately
throws:
  Exception - if the input format can't be set successfully



setInvertSelection
public void setInvertSelection(boolean value)(Code)
Sets whether the selection is inverted (only if instances are drawn WIHTOUT replacement).
Parameters:
  value - if true then selection is inverted



setNoReplacement
public void setNoReplacement(boolean value)(Code)
Sets whether instances are drawn with or with out replacement.
Parameters:
  value - if true then the replacement of instances is disabled



setOptions
public void setOptions(String[] options) throws Exception(Code)
Parses a given list of options.

Valid options are:

 -S <num>
 Specify the random number seed (default 1)
 -Z <num>
 The size of the output dataset, as a percentage of
 the input dataset (default 100)
 -no-replacement
 Disables replacement of instances
 (default: with replacement)
 -V
 Inverts the selection - only available with '-no-replacement'.

Parameters:
  options - the list of options as an array of strings
throws:
  Exception - if an option is not supported



setRandomSeed
public void setRandomSeed(int newSeed)(Code)
Sets the random number seed.
Parameters:
  newSeed - the new random number seed.



setSampleSizePercent
public void setSampleSizePercent(double newSampleSizePercent)(Code)
Sets the size of the subsample, as a percentage of the original set.
Parameters:
  newSampleSizePercent - the subsample set size, between 0 and 100.



Fields inherited from weka.filters.Filter
protected boolean m_FirstBatchDone(Code)(Java Doc)
protected RelationalLocator m_InputRelAtts(Code)(Java Doc)
protected StringLocator m_InputStringAtts(Code)(Java Doc)
protected boolean m_NewBatch(Code)(Java Doc)
protected RelationalLocator m_OutputRelAtts(Code)(Java Doc)
protected StringLocator m_OutputStringAtts(Code)(Java Doc)

Methods inherited from weka.filters.Filter
public static void batchFilterFile(Filter filter, String[] options) throws Exception(Code)(Java Doc)
public boolean batchFinished() throws Exception(Code)(Java Doc)
protected void bufferInput(Instance instance)(Code)(Java Doc)
protected void copyValues(Instance instance, boolean isInput)(Code)(Java Doc)
protected void copyValues(Instance instance, boolean instSrcCompat, Instances srcDataset, Instances destDataset)(Code)(Java Doc)
public static void filterFile(Filter filter, String[] options) throws Exception(Code)(Java Doc)
protected void flushInput()(Code)(Java Doc)
public Capabilities getCapabilities()(Code)(Java Doc)
public Capabilities getCapabilities(Instances data)(Code)(Java Doc)
protected Instances getInputFormat()(Code)(Java Doc)
public Instances getOutputFormat()(Code)(Java Doc)
protected void initInputLocators(Instances data, int[] indices)(Code)(Java Doc)
protected void initOutputLocators(Instances data, int[] indices)(Code)(Java Doc)
public boolean input(Instance instance) throws Exception(Code)(Java Doc)
protected Instances inputFormatPeek()(Code)(Java Doc)
public boolean isFirstBatchDone()(Code)(Java Doc)
public boolean isNewBatch()(Code)(Java Doc)
public boolean isOutputFormatDefined()(Code)(Java Doc)
public static void main(String[] args)(Code)(Java Doc)
public static Filter[] makeCopies(Filter model, int num) throws Exception(Code)(Java Doc)
public static Filter makeCopy(Filter model) throws Exception(Code)(Java Doc)
public int numPendingOutput()(Code)(Java Doc)
public Instance output()(Code)(Java Doc)
protected Instances outputFormatPeek()(Code)(Java Doc)
public Instance outputPeek()(Code)(Java Doc)
protected void push(Instance instance)(Code)(Java Doc)
protected void resetQueue()(Code)(Java Doc)
protected static void runFilter(Filter filter, String[] options)(Code)(Java Doc)
public boolean setInputFormat(Instances instanceInfo) throws Exception(Code)(Java Doc)
protected void setOutputFormat(Instances outputFormat)(Code)(Java Doc)
protected void testInputFormat(Instances instanceInfo) throws Exception(Code)(Java Doc)
public static Instances useFilter(Instances data, Filter filter) throws Exception(Code)(Java Doc)

Methods inherited from java.lang.Object
native protected Object clone() throws CloneNotSupportedException(Code)(Java Doc)
public boolean equals(Object obj)(Code)(Java Doc)
protected void finalize() throws Throwable(Code)(Java Doc)
final native public Class getClass()(Code)(Java Doc)
native public int hashCode()(Code)(Java Doc)
final native public void notify()(Code)(Java Doc)
final native public void notifyAll()(Code)(Java Doc)
public String toString()(Code)(Java Doc)
final native public void wait(long timeout) throws InterruptedException(Code)(Java Doc)
final public void wait(long timeout, int nanos) throws InterruptedException(Code)(Java Doc)
final public void wait() throws InterruptedException(Code)(Java Doc)

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