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Java Source Code / Java Documentation » Workflow Engines » pegasus 2.1.0 » org.griphyn.common.catalog.replica 
Source Cross Reference  Class Diagram Java Document (Java Doc) 


java.lang.Object
   org.griphyn.common.catalog.replica.SimpleFile

SimpleFile
public class SimpleFile implements ReplicaCatalog(Code)
This class implements a replica catalog on top of a simple file which contains two or more columns. It is neither transactionally safe, nor advised to use for production purposes in any way. Multiple concurrent instances will clobber each other!

The site attribute should be specified whenever possible. The attribute key for the site attribute is "pool". For the shell planner, its value will always be "local".

The class is permissive in what inputs it accepts. The LFN may or may not be quoted. If it contains linear whitespace, quotes, backslash or an equality sign, it must be quoted and escaped. Ditto for the PFN. The attribute key-value pairs are separated by an equality sign without any whitespaces. The value may be in quoted. The LFN sentiments about quoting apply.

 LFN PFN
 LFN PFN a=b [..]
 LFN PFN a="b" [..]
 "LFN w/LWS" "PFN w/LWS" [..]
 
The class is strict when producing (storing) results. The LFN and PFN are only quoted and escaped, if necessary. The attribute values are always quoted and escaped.
author:
   Jens-S. Vöckler
version:
   $Revision: 216 $


Field Summary
protected  Stringm_filename
     Records the name of the on-disk representation.
protected  Mapm_lfn
     Maintains a memory slurp of the file representation.
protected  booleanm_quote
     Records the quoting mode for LFNs and PFNs.

Constructor Summary
public  SimpleFile()
     Default empty constructor creates an object that is not yet connected to any database.

Method Summary
public  intclear()
     Removes everything.
public  voidclose()
     This operation will dump the in-memory representation back onto disk.
public  booleanconnect(String filename)
     Reads the on-disk map file into memory.
Parameters:
  filename - is the name of the file to read.
public  booleanconnect(Properties props)
     Establishes a connection to the database from the properties. You will need to specify a "file" property to point to the location of the on-disk instance.
public  intdelete(String lfn, String pfn)
     Deletes a specific mapping from the replica catalog.
public  intdelete(Map x, boolean matchAttributes)
     Deletes multiple mappings into the replica catalog.
public  intdelete(String lfn, ReplicaCatalogEntry tuple)
     Deletes a very specific mapping from the replica catalog.
public  intdelete(String lfn, String name, Object value)
     Deletes all PFN entries for a given LFN from the replica catalog where the PFN attribute is found, and matches exactly the object value.
public  intdeleteByResource(String lfn, String handle)
     Deletes all PFN entries for a given LFN from the replica catalog where the resource handle is found.
public  intinsert(String lfn, ReplicaCatalogEntry tuple)
     Inserts a new mapping into the replica catalog.
public  intinsert(String lfn, String pfn, String handle)
     Inserts a new mapping into the replica catalog.
public  intinsert(Map x)
     Inserts multiple mappings into the replica catalog.
public  booleanisClosed()
     Predicate to check, if the connection with the catalog's implementation is still active.
public  Setlist()
     Lists all logical filenames in the catalog.
public  Setlist(String constraint)
     Lists a subset of all logical filenames in the catalog.
Parameters:
  constraint - is a constraint for the logical filename only.
public  Stringlookup(String lfn, String handle)
     Retrieves the entry for a given filename and site handle from the replica catalog.
Parameters:
  lfn - is the logical filename to obtain information for.
Parameters:
  handle - is the resource handle to obtain entries for.
public  Collectionlookup(String lfn)
     Retrieves all entries for a given LFN from the replica catalog. Each entry in the result set is a tuple of a PFN and all its attributes.
Parameters:
  lfn - is the logical filename to obtain information for.
public  Maplookup(Set lfns)
     Retrieves multiple entries for a given logical filename, up to the complete catalog.
public  Maplookup(Set lfns, String handle)
     Retrieves multiple entries for a given logical filename, up to the complete catalog.
public  Maplookup(Map constraints)
     Retrieves multiple entries for a given logical filename, up to the complete catalog.
public  SetlookupNoAttributes(String lfn)
     Retrieves all entries for a given LFN from the replica catalog. Each entry in the result set is just a PFN string.
public  MaplookupNoAttributes(Set lfns)
     Retrieves multiple entries for a given logical filename, up to the complete catalog.
public  MaplookupNoAttributes(Set lfns, String handle)
     Retrieves multiple entries for a given logical filename, up to the complete catalog.
public  booleanparse(String line, int lineno)
    
public  Stringquote(Escape e, String s)
     Quotes a string only if necessary.
public  intremove(String lfn)
     Removes all mappings for an LFN from the replica catalog.
Parameters:
  lfn - is the logical filename to remove all mappings for.
public  intremove(Set lfns)
     Removes all mappings for a set of LFNs.
Parameters:
  lfns - is a set of logical filename to remove all mappings for.
public  intremoveByAttribute(String name, Object value)
     Removes all entries from the replica catalog where the PFN attribute is found, and matches exactly the object value.
Parameters:
  name - is the PFN attribute key to look for.
Parameters:
  value - is an exact match of the attribute value to match.
public  intremoveByAttribute(String handle)
     Removes all entries associated with a particular resource handle. This is useful, if a site goes offline.

Field Detail
m_filename
protected String m_filename(Code)
Records the name of the on-disk representation.



m_lfn
protected Map m_lfn(Code)
Maintains a memory slurp of the file representation.



m_quote
protected boolean m_quote(Code)
Records the quoting mode for LFNs and PFNs. If false, only quote as necessary. If true, always quote all LFNs and PFNs.




Constructor Detail
SimpleFile
public SimpleFile()(Code)
Default empty constructor creates an object that is not yet connected to any database. You must use support methods to connect before this instance becomes usable.
See Also:   SimpleFile.connect(Properties)




Method Detail
clear
public int clear()(Code)
Removes everything. Use with caution! the number of removed entries.



close
public void close()(Code)
This operation will dump the in-memory representation back onto disk. The store operation is strict in what it produces. The LFN and PFN records are only quoted, if they require quotes, because they contain special characters. The attributes are always quoted and thus quote-escaped.



connect
public boolean connect(String filename)(Code)
Reads the on-disk map file into memory.
Parameters:
  filename - is the name of the file to read. true, if the in-memory data structures appear sound.



connect
public boolean connect(Properties props)(Code)
Establishes a connection to the database from the properties. You will need to specify a "file" property to point to the location of the on-disk instance. If the property "quote" is set to a true value, LFNs and PFNs are always quoted. By default, and if false, LFNs and PFNs are only quoted as necessary.
Parameters:
  props - is the property table with sufficient settings toestablish a link with the database. true if connected, false if failed to connect.
throws:
  Error - subclasses for runtime errors in the class loader.



delete
public int delete(String lfn, String pfn)(Code)
Deletes a specific mapping from the replica catalog. We don't care about the resource handle. More than one entry could theoretically be removed. Upon removal of an entry, all attributes associated with the PFN also evaporate (cascading deletion).
Parameters:
  lfn - is the logical filename in the tuple.
Parameters:
  pfn - is the physical filename in the tuple. the number of removed entries.



delete
public int delete(Map x, boolean matchAttributes)(Code)
Deletes multiple mappings into the replica catalog. The input is a map indexed by the LFN. The value for each LFN key is a collection of replica catalog entries. On setting matchAttributes to false, all entries having matching lfn pfn mapping to an entry in the Map are deleted. However, upon removal of an entry, all attributes associated with the pfn also evaporate (cascaded deletion).
Parameters:
  x - is a map from logical filename string to list ofreplica catalog entries.
Parameters:
  matchAttributes - whether mapping should be deleted only if allattributes match. the number of deletions.
See Also:   ReplicaCatalogEntry



delete
public int delete(String lfn, ReplicaCatalogEntry tuple)(Code)
Deletes a very specific mapping from the replica catalog. The LFN must be matches, the PFN, and all PFN attributes specified in the replica catalog entry. More than one entry could theoretically be removed. Upon removal of an entry, all attributes associated with the PFN also evaporate (cascading deletion).
Parameters:
  lfn - is the logical filename in the tuple.
Parameters:
  tuple - is a description of the PFN and its attributes. the number of removed entries, either 0 or 1.



delete
public int delete(String lfn, String name, Object value)(Code)
Deletes all PFN entries for a given LFN from the replica catalog where the PFN attribute is found, and matches exactly the object value. This method may be useful to remove all replica entries that have a certain MD5 sum associated with them. It may also be harmful overkill.
Parameters:
  lfn - is the logical filename to look for.
Parameters:
  name - is the PFN attribute name to look for.
Parameters:
  value - is an exact match of the attribute value to match. the number of removed entries.



deleteByResource
public int deleteByResource(String lfn, String handle)(Code)
Deletes all PFN entries for a given LFN from the replica catalog where the resource handle is found. Karan requested this convenience method, which can be coded like
 delete( lfn, RESOURCE_HANDLE, handle )
 

Parameters:
  lfn - is the logical filename to look for.
Parameters:
  handle - is the resource handle the number of entries removed.



insert
public int insert(String lfn, ReplicaCatalogEntry tuple)(Code)
Inserts a new mapping into the replica catalog. Any existing mapping of the same LFN and PFN will be replaced, including all its attributes.
Parameters:
  lfn - is the logical filename under which to book the entry.
Parameters:
  tuple - is the physical filename and associated PFN attributes. number of insertions, should always be 1. On failure,throw an exception, don't use zero.



insert
public int insert(String lfn, String pfn, String handle)(Code)
Inserts a new mapping into the replica catalog. This is a convenience function exposing the resource handle. Internally, the ReplicaCatalogEntry element will be contructed, and passed to the appropriate insert function.
Parameters:
  lfn - is the logical filename under which to book the entry.
Parameters:
  pfn - is the physical filename associated with it.
Parameters:
  handle - is a resource handle where the PFN resides. number of insertions, should always be 1. On failure,throw an exception, don't use zero.
See Also:   SimpleFile.insert(String,ReplicaCatalogEntry)
See Also:   ReplicaCatalogEntry



insert
public int insert(Map x)(Code)
Inserts multiple mappings into the replica catalog. The input is a map indexed by the LFN. The value for each LFN key is a collection of replica catalog entries. Note that this operation will replace existing entries.
Parameters:
  x - is a map from logical filename string to list of replicacatalog entries. the number of insertions.
See Also:   org.griphyn.common.catalog.ReplicaCatalogEntry



isClosed
public boolean isClosed()(Code)
Predicate to check, if the connection with the catalog's implementation is still active. This helps determining, if it makes sense to call close(). true, if the implementation is disassociated, false otherwise.
See Also:   SimpleFile.close()



list
public Set list()(Code)
Lists all logical filenames in the catalog. A set of all logical filenames known to the catalog.



list
public Set list(String constraint)(Code)
Lists a subset of all logical filenames in the catalog.
Parameters:
  constraint - is a constraint for the logical filename only. Itis a string that has some meaning to the implementing system. Thiscan be a SQL wildcard for queries, or a regular expression forJava-based memory collections. A set of logical filenames that match. The set may be empty



lookup
public String lookup(String lfn, String handle)(Code)
Retrieves the entry for a given filename and site handle from the replica catalog.
Parameters:
  lfn - is the logical filename to obtain information for.
Parameters:
  handle - is the resource handle to obtain entries for. the (first) matching physical filename, ornull if no match was found.



lookup
public Collection lookup(String lfn)(Code)
Retrieves all entries for a given LFN from the replica catalog. Each entry in the result set is a tuple of a PFN and all its attributes.
Parameters:
  lfn - is the logical filename to obtain information for. a collection of replica catalog entries
See Also:   ReplicaCatalogEntry



lookup
public Map lookup(Set lfns)(Code)
Retrieves multiple entries for a given logical filename, up to the complete catalog. Retrieving full catalogs should be harmful, but may be helpful in an online display or portal.
Parameters:
  lfns - is a set of logical filename strings to look up. a map indexed by the LFN. Each value is a collectionof replica catalog entries for the LFN.
See Also:   org.griphyn.common.catalog.ReplicaCatalogEntry



lookup
public Map lookup(Set lfns, String handle)(Code)
Retrieves multiple entries for a given logical filename, up to the complete catalog. Retrieving full catalogs should be harmful, but may be helpful in online display or portal.


Parameters:
  lfns - is a set of logical filename strings to look up.
Parameters:
  handle - is the resource handle, restricting the LFNs. a map indexed by the LFN. Each value is a collectionof replica catalog entries (all attributes).
See Also:   ReplicaCatalogEntry




lookup
public Map lookup(Map constraints)(Code)
Retrieves multiple entries for a given logical filename, up to the complete catalog. Retrieving full catalogs should be harmful, but may be helpful in online display or portal.
Parameters:
  constraints - is mapping of keys 'lfn', 'pfn', or anyattribute name, e.g. the resource handle 'pool', to a string thathas some meaning to the implementing system. This can be a SQLwildcard for queries, or a regular expression for Java-based memorycollections. Unknown keys are ignored. Using an empty map requeststhe complete catalog. a map indexed by the LFN. Each value is a collectionof replica catalog entries.
See Also:   ReplicaCatalogEntry



lookupNoAttributes
public Set lookupNoAttributes(String lfn)(Code)
Retrieves all entries for a given LFN from the replica catalog. Each entry in the result set is just a PFN string. Duplicates are reduced through the set paradigm.
Parameters:
  lfn - is the logical filename to obtain information for. a set of PFN strings



lookupNoAttributes
public Map lookupNoAttributes(Set lfns)(Code)
Retrieves multiple entries for a given logical filename, up to the complete catalog. Retrieving full catalogs should be harmful, but may be helpful in an online display or portal.
Parameters:
  lfns - is a set of logical filename strings to look up. a map indexed by the LFN. Each value is a setof PFN strings.



lookupNoAttributes
public Map lookupNoAttributes(Set lfns, String handle)(Code)
Retrieves multiple entries for a given logical filename, up to the complete catalog. Retrieving full catalogs should be harmful, but may be helpful in online display or portal.


Parameters:
  lfns - is a set of logical filename strings to look up.
Parameters:
  handle - is the resource handle, restricting the LFNs. a map indexed by the LFN. Each value is a set ofphysical filenames.




parse
public boolean parse(String line, int lineno)(Code)
Parses a line from the file replica catalog
Parameters:
  line - is the line to parse
Parameters:
  lineno - is the line number of this line true if a valid element was generated



quote
public String quote(Escape e, String s)(Code)
Quotes a string only if necessary. This methods first determines, if a strings requires quoting, because it contains whitespace, an equality sign, quotes, or a backslash. If not, the string is not quoted. If the input contains forbidden characters, it is placed into quotes and quote and backslash are backslash escaped.

However, if the property "quote" had a true value when connecting to the database, output will always be quoted.
Parameters:
  e - is the Escape instance used to escape strings.
Parameters:
  s - is the string that may require quoting either the original string, or a newly allocated instanceto an escaped string.




remove
public int remove(String lfn)(Code)
Removes all mappings for an LFN from the replica catalog.
Parameters:
  lfn - is the logical filename to remove all mappings for. the number of removed entries.



remove
public int remove(Set lfns)(Code)
Removes all mappings for a set of LFNs.
Parameters:
  lfns - is a set of logical filename to remove all mappings for. the number of removed entries.
See Also:   SimpleFile.remove(String)



removeByAttribute
public int removeByAttribute(String name, Object value)(Code)
Removes all entries from the replica catalog where the PFN attribute is found, and matches exactly the object value.
Parameters:
  name - is the PFN attribute key to look for.
Parameters:
  value - is an exact match of the attribute value to match. the number of removed entries.



removeByAttribute
public int removeByAttribute(String handle)(Code)
Removes all entries associated with a particular resource handle. This is useful, if a site goes offline. It is a convenience method, which calls the generic removeByAttribute method.
Parameters:
  handle - is the site handle to remove all entries for. the number of removed entries.
See Also:   SimpleFile.removeByAttribute(String,Object)



Methods inherited from java.lang.Object
native protected Object clone() throws CloneNotSupportedException(Code)(Java Doc)
public boolean equals(Object obj)(Code)(Java Doc)
protected void finalize() throws Throwable(Code)(Java Doc)
final native public Class getClass()(Code)(Java Doc)
native public int hashCode()(Code)(Java Doc)
final native public void notify()(Code)(Java Doc)
final native public void notifyAll()(Code)(Java Doc)
public String toString()(Code)(Java Doc)
final native public void wait(long timeout) throws InterruptedException(Code)(Java Doc)
final public void wait(long timeout, int nanos) throws InterruptedException(Code)(Java Doc)
final public void wait() throws InterruptedException(Code)(Java Doc)

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