Java Doc for SubInfo.java in  » Workflow-Engines » pegasus-2.1.0 » org » griphyn » cPlanner » classes » Java Source Code / Java DocumentationJava Source Code and Java Documentation

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Java Source Code / Java Documentation » Workflow Engines » pegasus 2.1.0 » org.griphyn.cPlanner.classes   Source Cross Reference   Class Diagram   Java Document (Java Doc)   java.lang.Object    org.griphyn.cPlanner.classes.Data       org.griphyn.cPlanner.classes.SubInfo All known Subclasses:   org.griphyn.cPlanner.classes.AggregatedJob,  org.griphyn.cPlanner.classes.GRMSJob,  org.griphyn.cPlanner.classes.TransferJob, SubInfo public class SubInfo extends Data implements GraphNodeContent(Code) The object of this class holds the information to generate a submit file about one particular job making the Dag. author:    Karan Vahi author:    Gaurang Mehta version:    $Revision: 222 $ Field Summary final public static  int CLEANUP_JOB      Denotes a cleanup job, that removes the files that from the remote working directories of the remote sites. final public static  int COMPUTE_JOB      Denotes a compute job. final public static  int CREATE_DIR_JOB      Denotes a job that creates directories at the remote pools. final public static  int INTER_POOL_JOB      Denotes a job that transfers the output of a compute node to the site where the child compute node is to be generated. final public static  int REPLICA_REG_JOB      Denotes a job that registers in the replica mechanism the materialized files. final public static  int STAGED_COMPUTE_JOB      Denotes a job for which the executable has been staged as part of the workflow. final public static  int STAGE_IN_JOB      Denotea a job that is used to stage in the input files for a compute job. final public static  int STAGE_OUT_JOB      Denotes a job that transfers the date generated by a compute job to the output pool specified by the user. final public static  int UNASSIGNED_JOB      Denotes a job that does not fall into the other categories. public  String condorUniverse      The universe in which the job has to be executed. public  Condor condorVariables      For Condor Namespace. public  Dagman dagmanVariables      The DAGMAN namespace profile variable holding the dagman profiles. public  String dvName      The name of the derivation in Chimera that generated the job. public  String dvNamespace      The namespace to which the derivation is bound. public  String dvVersion      The version of the derivation. public  ENV envVariables      To accomodate the environment variables which might needed to be set. public  String executable      The path of the executable on the machine at which the job is executed. public  String executionPool      The pool on which this job has been decided to be executed by the Interpool Engine. public  Globus globusRSL      The namespace object containing the globus rsl attributes which the user specifies in the dax, or the pool file or the properties file. public  String globusScheduler      The globus Scheduler for the job. public  Hints hints      To accomodate all the hints that maybe passed through the DAX. public  Set inputFiles      Contains the input files for the submit file. public  int jobClass      The type of the job. public  String jobID      Identifies of which VDS Super Node is a job associated with. public  String jobName      The name of the job. public  int level      Identifies the level of the job in the dax. public  String logicalId      The logical id of the job as referred to in the dax. public  String logicalName      The logical name of the transformation which is executed as a part of this job. public  String namespace      The namespace to which the transformation is bound. public  Set outputFiles      Contains the output files for the submit file. public  String stdErr      File which contains standard error. public  String stdIn      File which contains stdin (keyboard input). public  String stdOut      File which contains stdout. public  String strargs      The arguements for the job. public  VDS vdsNS      The VDS namespace variable. public  String version      The version of the transformation. Constructor Summary public   SubInfo()      Intialises the member variables. public   SubInfo(SubInfo job)      Overloaded constructor. Method Summary public  void addInputFile(PegasusFile file)      Adds an input file to the underlying collection of input files associated with the job. public  void addOutputFile(PegasusFile file)      Adds an output file to the underlying collection of output files associated with the job. public  Object clone()      Returns a new copy of the Object. public  boolean equals(Object obj)      Checks if an object is similar to the one referred to by this class. We compare the primary key to determine if it is the same or not. Parameters:   obj - the object for which equalsto is applied. public  String getArguments()      Returns the argument string with which the job has to be invoked. public  String getCompleteDVName()      Constructs the fully qualified name of the corresponding derivation used to generate this job in Chimera including the namespace and version. public  String getCompleteTCName()      Constructs the fully qualified name of a transformation with which to query the TC, including the namespace and version. protected  String getDOTColor()      Returns the color with which DOT should color the node representing the job. public  String getDVName()      Returns the name of the underlying derivation. public  String getDVNamespace()      Returns the namespace of the underlying derivation. public  String getDVVersion()      Returns the version of the underlying derivation. public  String getID()      Returns the ID associated with the job. public  Set getInputFiles()      Returns the set of input files associated with the job. public  String getJobManager()      Returnss the remote jobmanager on which the job has to run. public  int getJobType()      Returns the type of the job. public  String getJobTypeDescription()      Gets the textual description of the type associated with the job. public  String getJobTypeDescription(int type)      Gets the textual description of the type that can be associated with a job. Parameters:   type - the type of the job. public  int getLevel()      Returns the level associated with the job. public  String getLogicalID()      Returns the logical id of the job. public  String getName()      Returns the name of the job. public  Set getOutputFiles()      Returns the set of output files associated with the job. public  String getPreScriptArguments()      Returns the arguments to the prescript for the job if set. public  String getPreScriptPath()      Returns the path to the prescript for the job if set. public  String getRemoteExecutable()      Returns the path of the underlying executable on the remote grid site. public  String getSiteHandle()      Returns the handle of the site where the job is scheduled. public  String getStagedExecutableBaseName()      Returns the basename for the staged executable corresponding to the job. public static  String getStagedExecutableBaseName(String txNamespace, String txName, String txVersion)      Returns the basename for the staged executable corresponding to the job. public  String getStdErr()      Returns the file to which the stderr of the job is written to. public  String getStdIn()      Returns the file from which the stdin is picked up. public  String getStdOut()      Returns the file to which the stdout of the job is written to. public  String getTXName()      Returns the name of the underlying transformation. public  String getTXNamespace()      Returns the namespace of the underlying transformation. public  String getTXVersion()      Returns the version of the underlying transformation. public  String getUniverse()      Returns the universe associated with the job. public  String getVDSSuperNode()      Returns the name of the compute job of VDS supernode containing this job. public  boolean isMPIJob()      Returns a boolean value denoting whether the job is MPI or not. public  void mergeProfiles(SubInfo job)      Merges profiles from another job to this job in a controlled fashion. The merging of the profile is dependant upon the namespace to which it belongs. public  void resetProfiles()      Resets all the profiles associated with the job. public  boolean runInWorkDirectory()      Returns whether a job should be run in the work directory or not. If a job is not run in the work directory, then it should be run in the submit directory. public  void setArguments(String arguments)      Sets the argument string with which the job has to be invoked. public  void setDVName(String name)      Sets the derivation name of the underlying derivation. public  void setDVNamespace(String ns)      Sets the derivation namespace to be associated with the job. public  void setDVVersion(String vs)      Sets the version of the underlying derivation. public  void setDerivation(String ns, String name, String vs)      Sets the various attributes of underlying derivation. public  void setInputFiles(Set ipFiles)      Sets the input files associated with the job. public  void setJobManager(String jobmanager)      Sets the remote jobmanager on which the job has to run. public  void setJobType(int type)      Sets the type of the job. public  void setLevel(int value)      Sets the level for the job. public  void setLogicalID(String id)      Setter method to set the logical id of the job. public  void setName(String name)      Setter method to set the name of the job. public  void setOutputFiles(Set opFiles)      Sets the output files associated with the job. public  void setPreScript(String path)      It sets the prescript for the job. public  void setPreScript(String path, String arguments)      It sets the prescript for the job. public  void setRemoteExecutable(String path)      Sets the path to the executable on the remote grid site. public  void setSiteHandle(String site)      public  void setStdErr(String fileName)      Sets the file to which the stderr of the job needs to be written to at the remote grid site. public  void setStdIn(String fileName)      Sets the file to from which to pick up the stdin for the job. public  void setStdOut(String fileName)      Sets the file to which the stdout of the job needs to be written to at the remote grid site. public  void setTXName(String name)      Sets the transformation name of the underlying transformation. public  void setTXNamespace(String ns)      Sets the transformation namespace to be associated with the job. public  void setTXVersion(String vs)      Sets the version of the underlying transformation. public  void setTransformation(String ns, String name, String vs)      Sets the various attributes of underlying transformation. public  void setUniverse(String universe)      Set the universe associated with the job. public  void setVDSSuperNode(String name)      Setter method to the name of the compute job of VDS supernode containing this job. public  String toDOT()      Returns the DOT description of the object. public  void toDOT(Writer stream, String indent)      Returns the DOT description of the object. public  String toString()      Returns a textual description of the object. public  boolean typeInRange(int type)      Returns whether the job type value for the job is in range or not. Parameters:   type - the job type. public  void updateProfiles(TransformationCatalogEntry entry)      Updates all the profile namespaces with the information associated in the transformation catalog for this job. It ends up updating already existing information, and adds supplemental new information if present in the transformation catalog. The method does not explicitly check whehter the data object passed refers to this job or not. public  void updateProfiles(PegasusProperties properties)      Updates all the profile namespaces with the information specified by the user in the properties file, that apply to this job. It ends up updating already existing information, and adds supplemental new information if present in the properties file. The method does not explicitly check whehter the data object passed refers to this job or not. public  void updateProfiles(List profiles)      Updates all the profile namespaces with the information specified in list of profile objects passed. Field Detail CLEANUP_JOB final public static int CLEANUP_JOB(Code) Denotes a cleanup job, that removes the files that from the remote working directories of the remote sites. COMPUTE_JOB final public static int COMPUTE_JOB(Code) Denotes a compute job. Generally these are the jobs that are specified in the DAX. CREATE_DIR_JOB final public static int CREATE_DIR_JOB(Code) Denotes a job that creates directories at the remote pools. INTER_POOL_JOB final public static int INTER_POOL_JOB(Code) Denotes a job that transfers the output of a compute node to the site where the child compute node is to be generated. REPLICA_REG_JOB final public static int REPLICA_REG_JOB(Code) Denotes a job that registers in the replica mechanism the materialized files. STAGED_COMPUTE_JOB final public static int STAGED_COMPUTE_JOB(Code) Denotes a job for which the executable has been staged as part of the workflow. STAGE_IN_JOB final public static int STAGE_IN_JOB(Code) Denotea a job that is used to stage in the input files for a compute job. STAGE_OUT_JOB final public static int STAGE_OUT_JOB(Code) Denotes a job that transfers the date generated by a compute job to the output pool specified by the user. UNASSIGNED_JOB final public static int UNASSIGNED_JOB(Code) Denotes a job that does not fall into the other categories. It might denote an error condition or a faulty logic in the planner. condorUniverse public String condorUniverse(Code) The universe in which the job has to be executed. Can be standard, vanilla or globus. condorVariables public Condor condorVariables(Code) For Condor Namespace. This contains the extra Condor options which one may want to specify. These are copied straightaway to the Submit file. dagmanVariables public Dagman dagmanVariables(Code) The DAGMAN namespace profile variable holding the dagman profiles. It holds the prescript and the postscripts for the jobs. dvName public String dvName(Code) The name of the derivation in Chimera that generated the job. dvNamespace public String dvNamespace(Code) The namespace to which the derivation is bound. dvVersion public String dvVersion(Code) The version of the derivation. envVariables public ENV envVariables(Code) To accomodate the environment variables which might needed to be set. executable public String executable(Code) The path of the executable on the machine at which the job is executed. executionPool public String executionPool(Code) The pool on which this job has been decided to be executed by the Interpool Engine. globusRSL public Globus globusRSL(Code) The namespace object containing the globus rsl attributes which the user specifies in the dax, or the pool file or the properties file. globusScheduler public String globusScheduler(Code) The globus Scheduler for the job. hints public Hints hints(Code) To accomodate all the hints that maybe passed through the DAX. inputFiles public Set inputFiles(Code) Contains the input files for the submit file. They are vector of PegasusFile Objects which store the transiency information of each logical file. See Also:   org.griphyn.cPlanner.classes.PegasusFile jobClass public int jobClass(Code) The type of the job. Pegasus tags the jobs according to the function of the job. The jobs are tagged according to the functionality they serve in the VDS super node. The job class can be unassigned compute job stage-in stage-out replica registration inter-pool transfer create-dir job staged-compute job jobID public String jobID(Code) Identifies of which VDS Super Node is a job associated with. VDS Supernode is identified by the jobName of the compute node in the super node. jobName public String jobName(Code) The name of the job. level public int level(Code) Identifies the level of the job in the dax. The level is bottom up from the final child node. logicalId public String logicalId(Code) The logical id of the job as referred to in the dax. logicalName public String logicalName(Code) The logical name of the transformation which is executed as a part of this job. Note: The tc is looked up by namespace__logicalName_version. namespace public String namespace(Code) The namespace to which the transformation is bound. outputFiles public Set outputFiles(Code) Contains the output files for the submit file. They are vector of PegasusFile Objects which store the transiency information of each logical file. See Also:   org.griphyn.cPlanner.classes.PegasusFile stdErr public String stdErr(Code) File which contains standard error. stdIn public String stdIn(Code) File which contains stdin (keyboard input). stdOut public String stdOut(Code) File which contains stdout. strargs public String strargs(Code) The arguements for the job. It is the contains the arguments for the job. This string is put in the arguments in Condor Submit File. vdsNS public VDS vdsNS(Code) The VDS namespace variable. version public String version(Code) The version of the transformation. Constructor Detail SubInfo public SubInfo()(Code) Intialises the member variables. SubInfo public SubInfo(SubInfo job)(Code) Overloaded constructor. Does a shallow copy of the job object passed. Parameters:   job - the SubInfo object containing the job description. Method Detail addInputFile public void addInputFile(PegasusFile file)(Code) Adds an input file to the underlying collection of input files associated with the job. Parameters:   file - the PegasusFile containing the input file. addOutputFile public void addOutputFile(PegasusFile file)(Code) Adds an output file to the underlying collection of output files associated with the job. Parameters:   file - the PegasusFile containing the output file. clone public Object clone()(Code) Returns a new copy of the Object. clone of the object. equals public boolean equals(Object obj)(Code) Checks if an object is similar to the one referred to by this class. We compare the primary key to determine if it is the same or not. Parameters:   obj - the object for which equalsto is applied. true if the primary key (jobName) match.else false. getArguments public String getArguments()(Code) Returns the argument string with which the job has to be invoked. the argument string. getCompleteDVName public String getCompleteDVName()(Code) Constructs the fully qualified name of the corresponding derivation used to generate this job in Chimera including the namespace and version. the complete derivation name. getCompleteTCName public String getCompleteTCName()(Code) Constructs the fully qualified name of a transformation with which to query the TC, including the namespace and version. the complete tranformation name. getDOTColor protected String getDOTColor()(Code) Returns the color with which DOT should color the node representing the job. the color. getDVName public String getDVName()(Code) Returns the name of the underlying derivation. name getDVNamespace public String getDVNamespace()(Code) Returns the namespace of the underlying derivation. namespace getDVVersion public String getDVVersion()(Code) Returns the version of the underlying derivation. version getID public String getID()(Code) Returns the ID associated with the job. Unfortunately currently it is the job name. the ID of the job. getInputFiles public Set getInputFiles()(Code) Returns the set of input files associated with the job. Set of PegasusFile objects containing the input files. getJobManager public String getJobManager()(Code) Returnss the remote jobmanager on which the job has to run. the jobmanager url. See Also:   SubInfo.setJobManager() getJobType public int getJobType()(Code) Returns the type of the job. Returns the value matching the jobClass. int value of job class. getJobTypeDescription public String getJobTypeDescription()(Code) Gets the textual description of the type associated with the job. the textual description of the type associated with the job. getJobTypeDescription public String getJobTypeDescription(int type)(Code) Gets the textual description of the type that can be associated with a job. Parameters:   type - the type of the job. the textual description of the type associated with the job. getLevel public int getLevel()(Code) Returns the level associated with the job. int designating the level getLogicalID public String getLogicalID()(Code) Returns the logical id of the job. String getName public String getName()(Code) Returns the name of the job. String getOutputFiles public Set getOutputFiles()(Code) Returns the set of output files associated with the job. Set of PegasusFile objects containing the output files. getPreScriptArguments public String getPreScriptArguments()(Code) Returns the arguments to the prescript for the job if set. the argumetns to the prescript script that has to be run as aprescript, else null if no prescript has been set. getPreScriptPath public String getPreScriptPath()(Code) Returns the path to the prescript for the job if set. the path to the script that has to be run as a prescript, elsenull if no prescript has been set. getRemoteExecutable public String getRemoteExecutable()(Code) Returns the path of the underlying executable on the remote grid site. the path to the executable if set. getSiteHandle public String getSiteHandle()(Code) Returns the handle of the site where the job is scheduled. site handle. getStagedExecutableBaseName public String getStagedExecutableBaseName()(Code) Returns the basename for the staged executable corresponding to the job. the staged executable basename getStagedExecutableBaseName public static String getStagedExecutableBaseName(String txNamespace, String txName, String txVersion)(Code) Returns the basename for the staged executable corresponding to the job. Parameters:   txNamespace - is the namespace in which the TR resides, may be null. Parameters:   txName - is the base name of the transformation, must not be null. Parameters:   txVersion - is the version of the TR, may be null the staged executable basename getStdErr public String getStdErr()(Code) Returns the file to which the stderr of the job is written to. the basename of the file. getStdIn public String getStdIn()(Code) Returns the file from which the stdin is picked up. the basename of the file. getStdOut public String getStdOut()(Code) Returns the file to which the stdout of the job is written to. the basename of the file. getTXName public String getTXName()(Code) Returns the name of the underlying transformation. name getTXNamespace public String getTXNamespace()(Code) Returns the namespace of the underlying transformation. namespace getTXVersion public String getTXVersion()(Code) Returns the version of the underlying transformation. version getUniverse public String getUniverse()(Code) Returns the universe associated with the job. the universe associate with job . getVDSSuperNode public String getVDSSuperNode()(Code) Returns the name of the compute job of VDS supernode containing this job. String isMPIJob public boolean isMPIJob()(Code) Returns a boolean value denoting whether the job is MPI or not. If no job type is specified in the globus rsl for the job, the job is assumed to be non mpi. boolean true if jobtype=mpi set in the globus rsl.false in all other cases. mergeProfiles public void mergeProfiles(SubInfo job)(Code) Merges profiles from another job to this job in a controlled fashion. The merging of the profile is dependant upon the namespace to which it belongs. Some profiles maybe overriden, others maybe summed up etc. Parameters:   job - the SubInfo object containing the job descriptionfor the job whose profiles have to be merged into this job. resetProfiles public void resetProfiles()(Code) Resets all the profiles associated with the job. runInWorkDirectory public boolean runInWorkDirectory()(Code) Returns whether a job should be run in the work directory or not. If a job is not run in the work directory, then it should be run in the submit directory. That would be the case if the job has been scheduled to site "local" and the class of the job coressponds to the auxillary jobs that have been created by Pegasus. boolean true to indicate job can run in work directory,false job cant be run. setArguments public void setArguments(String arguments)(Code) Sets the argument string with which the job has to be invoked. Parameters:   arguments - the argument string. setDVName public void setDVName(String name)(Code) Sets the derivation name of the underlying derivation. Parameters:   name - the logical name of the derivation. setDVNamespace public void setDVNamespace(String ns)(Code) Sets the derivation namespace to be associated with the job. Parameters:   ns - the namespace. setDVVersion public void setDVVersion(String vs)(Code) Sets the version of the underlying derivation. Parameters:   vs - the version. setDerivation public void setDerivation(String ns, String name, String vs)(Code) Sets the various attributes of underlying derivation. Parameters:   ns - the namespace of the derivation. Parameters:   name - the logical name of the derivation. Parameters:   vs - the version of the derivation. setInputFiles public void setInputFiles(Set ipFiles)(Code) Sets the input files associated with the job. Parameters:   ipFiles - Set of PegasusFile objects containing the input files. setJobManager public void setJobManager(String jobmanager)(Code) Sets the remote jobmanager on which the job has to run. Parameters:   jobmanager - the jobmanager url. See Also:   SubInfo.getJobManager() setJobType public void setJobType(int type)(Code) Sets the type of the job. Parameters:   type - the type of the job. exception:   IllegalArgumentException - if the job type is outside its legalrange. See Also:   SubInfo.UNASSIGNED_JOB See Also:   SubInfo.COMPUTE_JOB See Also:   SubInfo.STAGE_IN_JOB See Also:   SubInfo.STAGE_OUT_JOB See Also:   SubInfo.REPLICA_REG_JOB See Also:   SubInfo.INTER_POOL_JOB See Also:   SubInfo.CREATE_DIR_JOB See Also:   SubInfo.STAGED_COMPUTE_JOB See Also:   SubInfo.CLEANUP_JOB setLevel public void setLevel(int value)(Code) Sets the level for the job. Parameters:   value - the level setLogicalID public void setLogicalID(String id)(Code) Setter method to set the logical id of the job. Parameters:   id - the logical id of the job. setName public void setName(String name)(Code) Setter method to set the name of the job. Parameters:   name - the name of the job. setOutputFiles public void setOutputFiles(Set opFiles)(Code) Sets the output files associated with the job. Parameters:   opFiles - Set of PegasusFile objects containing theoutput files. setPreScript public void setPreScript(String path)(Code) It sets the prescript for the job. The argument string is assumed to be empty. Parameters:   path - the path to the script that has to be run as a prescript. setPreScript public void setPreScript(String path, String arguments)(Code) It sets the prescript for the job. Parameters:   path - the path to the script that has to be run as a prescript. Parameters:   arguments - the arguments to the prescript, setRemoteExecutable public void setRemoteExecutable(String path)(Code) Sets the path to the executable on the remote grid site. This executable is invoked whenever a job is run on the remote grid site. Parameters:   path - the path to the underlying transformation on the remote gridsite. See Also:   SubInfo.getSiteHandle() setSiteHandle public void setSiteHandle(String site)(Code) Sets the site handle of the site, where teh job is to be executed Parameters:   site - the site handle. setStdErr public void setStdErr(String fileName)(Code) Sets the file to which the stderr of the job needs to be written to at the remote grid site. Should be just the basename. The file appears in the remote working directory for that job. Parameters:   fileName - the basename of the file. setStdIn public void setStdIn(String fileName)(Code) Sets the file to from which to pick up the stdin for the job. The file is tracked via Replica Catalog, and is staged to the remote grid site. Parameters:   fileName - the basename of the file. setStdOut public void setStdOut(String fileName)(Code) Sets the file to which the stdout of the job needs to be written to at the remote grid site. Should be just the basename. The file appears in the remote working directory for that job. Parameters:   fileName - the basename of the file. setTXName public void setTXName(String name)(Code) Sets the transformation name of the underlying transformation. Parameters:   name - the logical name of the transformation. setTXNamespace public void setTXNamespace(String ns)(Code) Sets the transformation namespace to be associated with the job. Parameters:   ns - the namespace. setTXVersion public void setTXVersion(String vs)(Code) Sets the version of the underlying transformation. Parameters:   vs - the version. setTransformation public void setTransformation(String ns, String name, String vs)(Code) Sets the various attributes of underlying transformation. Parameters:   ns - the namespace of the transformation. Parameters:   name - the logical name of the transformation. Parameters:   vs - the version of the transformation. setUniverse public void setUniverse(String universe)(Code) Set the universe associated with the job. Parameters:   universe - the universe to be associated. setVDSSuperNode public void setVDSSuperNode(String name)(Code) Setter method to the name of the compute job of VDS supernode containing this job. Parameters:   name - the name of the job. toDOT public String toDOT() throws IOException(Code) Returns the DOT description of the object. This is used for visualizing the workflow. String containing the Partition object in XML. exception:   IOException - if something fishy happens to the stream. toDOT public void toDOT(Writer stream, String indent) throws IOException(Code) Returns the DOT description of the object. This is used for visualizing the workflow. Parameters:   stream - is a stream opened and ready for writing. This can alsobe a StringWriter for efficient output. Parameters:   indent - is a String of spaces used for prettyprinting. The initial amount of spaces should be an emptystring. The parameter is used internally for the recursivetraversal. exception:   IOException - if something fishy happens to the stream. toString public String toString()(Code) Returns a textual description of the object. textual description of the job. typeInRange public boolean typeInRange(int type)(Code) Returns whether the job type value for the job is in range or not. Parameters:   type - the job type. true if the value is in range.false if the value is not in range. updateProfiles public void updateProfiles(TransformationCatalogEntry entry)(Code) Updates all the profile namespaces with the information associated in the transformation catalog for this job. It ends up updating already existing information, and adds supplemental new information if present in the transformation catalog. The method does not explicitly check whehter the data object passed refers to this job or not. The calling method should ensure this. Parameters:   entry - the TCEntry object corresponding to theentry in the Transformation Catalog for the job. updateProfiles public void updateProfiles(PegasusProperties properties)(Code) Updates all the profile namespaces with the information specified by the user in the properties file, that apply to this job. It ends up updating already existing information, and adds supplemental new information if present in the properties file. The method does not explicitly check whehter the data object passed refers to this job or not. The calling method should ensure this. Parameters:   properties - the PegasusProperties object containingthe user properties. updateProfiles public void updateProfiles(List profiles)(Code) Updates all the profile namespaces with the information specified in list of profile objects passed. Pool catalog returns profile information as a list of Profile objects that need to be propogated to the job. It ends up updating already existing information, and adds supplemental new information if present in the properties file. Parameters:   profiles - the list of Profile objects that need to beincorporated in the jobs profile namespaces. Fields inherited from org.griphyn.cPlanner.classes.Data public String mLogMsg(Code)(Java Doc) public LogManager mLogger(Code)(Java Doc) Methods inherited from org.griphyn.cPlanner.classes.Data public String setToString(Set s, String delim)(Code)(Java Doc) abstract public String toString()(Code)(Java Doc) public String vectorToString(String heading, Vector vector)(Code)(Java Doc) Methods inherited from java.lang.Object native protected Object clone() throws CloneNotSupportedException(Code)(Java Doc) public boolean equals(Object obj)(Code)(Java Doc) protected void finalize() throws Throwable(Code)(Java Doc) final native public Class getClass()(Code)(Java Doc) native public int hashCode()(Code)(Java Doc) final native public void notify()(Code)(Java Doc) final native public void notifyAll()(Code)(Java Doc) public String toString()(Code)(Java Doc) final native public void wait(long timeout) throws InterruptedException(Code)(Java Doc) final public void wait(long timeout, int nanos) throws InterruptedException(Code)(Java Doc) final public void wait() throws InterruptedException(Code)(Java Doc)