Java Doc for ChunkSchema.java in  » Workflow-Engines » pegasus-2.1.0 » org » griphyn » vdl » dbschema » Java Source Code / Java DocumentationJava Source Code and Java Documentation

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Java Source Code / Java Documentation » Workflow Engines » pegasus 2.1.0 » org.griphyn.vdl.dbschema 
Source Cross Reference  Class Diagram Java Document (Java Doc) 


java.lang.Object
   org.griphyn.vdl.dbschema.DatabaseSchema
      org.griphyn.vdl.dbschema.ChunkSchema

ChunkSchema
public class ChunkSchema extends DatabaseSchema implements VDC(Code)
This class provides basic functionalities to interact with the backend database, such as insertion, deletion, and search of entities in the VDC.
author:
   Jens-S. Vöckler
author:
   Yong Zhao
version:
   $Revision: 50 $


Field Summary
final protected static  String[]c_lfn_names
     Name of the four parameter tables in human readable format.
protected  Cachem_cache
     A cache for definitions to avoid reloading from the database.
protected  booleanm_deferDeleteCommit
     Communication between saveDefinition and deleteDefinition in update mode.

Constructor Summary
public  ChunkSchema(String dbDriverName)
     Default constructor for the "chunk" schema.

Method Summary
public  booleancontainsDefinition(Definition definition)
     Search the database for the existence of a definition.
public  booleandeleteDefinition(Definition definition)
     Delete a specific Definition objects from the database.
public  java.util.ListdeleteDefinition(String namespace, String name, String version, int type)
     Delete Definition objects from the database.
protected  LonggetDefinitionId(Definition d)
     Obtains the primary key id for a given definition.
protected  java.util.ListgetDefinitionId(String namespace, String name, String version, int type)
     Obtains the list of primary key ids for a matching definitions. This method allows for wildcards in the usual fashion.
public  DefinitionloadDefinition(String namespace, String name, String version, int type)
     Loads a single Definition from the backend database into an Java object. This method does not allow wildcarding!
Parameters:
  namespace - namespace, null will be converted into empty string
Parameters:
  name - name, null will be converted into empty string
Parameters:
  version - version, null will be converted into empty string
Parameters:
  type - type of the definition (TR or DV), must not be -1.
public  booleansaveDefinition(Definition definition, boolean overwrite)
     Saves a Definition, that is either a Transformation or Derivation, into the backend database.
public  java.util.ListsearchDefinition(String namespace, String name, String version, int type)
     Search the database for definitions by ns::name:version triple and by type (either Transformation or Derivation).
public  java.util.ListsearchFilename(String lfn, int link)
     Searches the database for all derivations that contain a certain LFN. The linkage is an additional constraint.

Field Detail
c_lfn_names
final protected static String[] c_lfn_names(Code)
Name of the four parameter tables in human readable format.



m_cache
protected Cache m_cache(Code)
A cache for definitions to avoid reloading from the database.



m_deferDeleteCommit
protected boolean m_deferDeleteCommit(Code)
Communication between saveDefinition and deleteDefinition in update mode.




Constructor Detail
ChunkSchema
public ChunkSchema(String dbDriverName) throws ClassNotFoundException, NoSuchMethodException, InstantiationException, IllegalAccessException, InvocationTargetException, SQLException, IOException(Code)
Default constructor for the "chunk" schema.
Parameters:
  dbDriverName - is the database driver name




Method Detail
containsDefinition
public boolean containsDefinition(Definition definition) throws SQLException(Code)
Search the database for the existence of a definition.
Parameters:
  definition - the definition object to search for true, if the definition exists, false if not found



deleteDefinition
public boolean deleteDefinition(Definition definition) throws SQLException(Code)
Delete a specific Definition objects from the database. No wildcard matching will be done. "Fake" definitions are permissable, meaning it just has the secondary key triple.
Parameters:
  definition - is the definition specification to delete true is something was deleted, false if non existent.
See Also:   org.griphyn.vdl.classes.Definition.TRANSFORMATION
See Also:   org.griphyn.vdl.classes.Definition.DERIVATION
See Also:   



deleteDefinition
public java.util.List deleteDefinition(String namespace, String name, String version, int type) throws SQLException(Code)
Delete Definition objects from the database. This method allows for wildcards in the usual fashion. Use null for strings as wildcards, and -1 for the type wildcard. For efficiency reasons, this method will return an empty list.
Parameters:
  namespace - namespace, null to match any namespace
Parameters:
  name - name, null to match any name
Parameters:
  version - version, null to match any version
Parameters:
  type - definition type (TR or DV) a list containing all Definitions that were deleted
See Also:   org.griphyn.vdl.classes.Definition.TRANSFORMATION
See Also:   org.griphyn.vdl.classes.Definition.DERIVATION
See Also:   



getDefinitionId
protected Long getDefinitionId(Definition d) throws SQLException(Code)
Obtains the primary key id for a given definition. "Fake" definitions are permissable. This is an internal helper function.
Parameters:
  d - is a definition specification. the id of the definition, or null if not found.
See Also:   ChunkSchema.getDefinitionId(String,String,String,int)



getDefinitionId
protected java.util.List getDefinitionId(String namespace, String name, String version, int type) throws SQLException(Code)
Obtains the list of primary key ids for a matching definitions. This method allows for wildcards in the usual fashion. Use null for strings as wildcards, and -1 for the type wildcard. This method may return an empty list, but it will not return null. This is an internal helper function.
Parameters:
  namespace - namespace, null to match any namespace
Parameters:
  name - name, null to match any name
Parameters:
  version - version, null to match any version
Parameters:
  type - definition type (TR or DV) a possibly empty list containing all matchingdefinition ids as Longs.
See Also:   org.griphyn.vdl.classes.Definition.TRANSFORMATION
See Also:   org.griphyn.vdl.classes.Definition.DERIVATION
See Also:   
See Also:   ChunkSchema.getDefinitionId(Definition)
See Also:   



loadDefinition
public Definition loadDefinition(String namespace, String name, String version, int type) throws SQLException(Code)
Loads a single Definition from the backend database into an Java object. This method does not allow wildcarding!
Parameters:
  namespace - namespace, null will be converted into empty string
Parameters:
  name - name, null will be converted into empty string
Parameters:
  version - version, null will be converted into empty string
Parameters:
  type - type of the definition (TR or DV), must not be -1. the Definition as specified, or null if not found.
See Also:   org.griphyn.vdl.classes.Definition.TRANSFORMATION
See Also:   org.griphyn.vdl.classes.Definition.DERIVATION
See Also:   ChunkSchema.saveDefinition(Definition,boolean)



saveDefinition
public boolean saveDefinition(Definition definition, boolean overwrite) throws SQLException(Code)
Saves a Definition, that is either a Transformation or Derivation, into the backend database. This method, of course, does not allow wildcarding. The definition has to be completely specified and valid.
Parameters:
  definition - is the new Definition to store.
Parameters:
  overwrite - true, if existing defitions will be overwritten bynew ones with the same primary (or secondary) key (-set), or false,if a new definition will be rejected on key matches. true, if the backend database was changed, orfalse, if the definition was not accepted into the backend.
See Also:   org.griphyn.vdl.classes.Definition
See Also:   org.griphyn.vdl.classes.Transformation
See Also:   org.griphyn.vdl.classes.Derivation
See Also:   ChunkSchema.loadDefinition(String,String,String,int)



searchDefinition
public java.util.List searchDefinition(String namespace, String name, String version, int type) throws SQLException(Code)
Search the database for definitions by ns::name:version triple and by type (either Transformation or Derivation). This version of the search allows for jokers expressed as null value
Parameters:
  namespace - namespace, null to match any namespace
Parameters:
  name - name, null to match any name
Parameters:
  version - version, null to match any version
Parameters:
  type - type of definition (TR/DV, or both) a list of definitions
See Also:   org.griphyn.vdl.classes.Definition.TRANSFORMATION
See Also:   org.griphyn.vdl.classes.Definition.DERIVATION



searchFilename
public java.util.List searchFilename(String lfn, int link) throws SQLException(Code)
Searches the database for all derivations that contain a certain LFN. The linkage is an additional constraint. This method does not allow jokers.
Parameters:
  lfn - the LFN name
Parameters:
  link - the linkage type of the LFN a list of Definition items that match the criterion.
See Also:   org.griphyn.vdl.classes.LFN.NONE
See Also:   org.griphyn.vdl.classes.LFN.INPUT
See Also:   org.griphyn.vdl.classes.LFN.OUTPUT
See Also:   org.griphyn.vdl.classes.LFN.INOUT



Fields inherited from org.griphyn.vdl.dbschema.DatabaseSchema
protected DatabaseDriver m_dbdriver(Code)(Java Doc)
protected Properties m_dbschemaprops(Code)(Java Doc)

Methods inherited from org.griphyn.vdl.dbschema.DatabaseSchema
public boolean cachingMakesSense()(Code)(Java Doc)
public void close() throws SQLException(Code)(Java Doc)
protected void finalize() throws Throwable(Code)(Java Doc)
public static DatabaseSchema loadSchema(String dbSchemaName, String propertyPrefix, Object[] arguments) throws ClassNotFoundException, IOException, NoSuchMethodException, InstantiationException, IllegalAccessException, InvocationTargetException(Code)(Java Doc)
public static DatabaseSchema loadSchema(String propertyPrefix) throws ClassNotFoundException, IOException, NoSuchMethodException, InstantiationException, IllegalAccessException, InvocationTargetException(Code)(Java Doc)
protected void longOrNull(PreparedStatement ps, int pos, long l) throws SQLException(Code)(Java Doc)
protected String makeNotNull(String s)(Code)(Java Doc)
protected void stringOrNull(PreparedStatement ps, int pos, String s) throws SQLException(Code)(Java Doc)

Methods inherited from java.lang.Object
native protected Object clone() throws CloneNotSupportedException(Code)(Java Doc)
public boolean equals(Object obj)(Code)(Java Doc)
protected void finalize() throws Throwable(Code)(Java Doc)
final native public Class getClass()(Code)(Java Doc)
native public int hashCode()(Code)(Java Doc)
final native public void notify()(Code)(Java Doc)
final native public void notifyAll()(Code)(Java Doc)
public String toString()(Code)(Java Doc)
final native public void wait(long timeout) throws InterruptedException(Code)(Java Doc)
final public void wait(long timeout, int nanos) throws InterruptedException(Code)(Java Doc)
final public void wait() throws InterruptedException(Code)(Java Doc)

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